KEGG   Escherichia marmotae: C1192_10680
Entry
C1192_10680       CDS       T05353                                 
Name
(GenBank) exonuclease subunit SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ema  Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:ema00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ema03400]
    C1192_10680
DNA repair and recombination proteins [BR:ema03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C1192_10680
    Archaeal homologous recombinant proteins
     C1192_10680
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N ABC_tran AAA_21 cobW nSTAND3 NTPase_1 AAA_22 GTP_EFTU RsgA_GTPase
Other DBs
NCBI-ProteinID: AUT27527
Position
2049620..2052763
AA seq 1047 aa
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCT
DGKILADKVKDKLEMTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTALEKLQAQASGVALLAPEQVQSLTESLQVLTDEEKQLLAAQQ
QEQQSLNWLTRLDELQQEASRRQQALQLALTEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSTALAHTRQQIEEVNTRLQSTMVFRASIRHQAAKQSAELQHHQQTLNAWLQEHDRFRL
WNNELAGWRAQFSQQASERGHLRQWQQQLTHARQKLNALPAISLALTGDEVAVAQAQHAE
QRPLRQRLIALHGQIAPQQKRLAQLQATIQSVTQEQTQRNAALTEMRQRYKEKTQQLADV
KTICEQEERIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLENEVK
KLGEEGAALRGQLDALTWQLQRDENEAQSLRQDEQALTQEWQTLTASLNITLQPQDDIQP
WLTAQEEHEKQLQLLNQRQELQAQIAAHNQQIIQYQQQIEQRHQQLSTALADYALALPKE
DEEESWLSARQQEAQIWQQRQNELSGLQNRIQQLTPILETLPQSDELPHSEETVTLENWR
QIHEQCLALQSQQQTLQQQEVLAAQSLQNVQAQFDAALQASIFADQQAFLAALMDEQTLA
QLEQLKQNLENQRRQAQTLATQAAEALAQHQQHQPDGLDLTLTAEQIQQELAQTNQKLRE
NTTHQGEIRQQLKQDADNHQQQQTLMQQITQTTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLKRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDSAFAVK
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgaaccgttcgccagcaacggtctgtttgccattaccggcccaaccggc
gcgggtaaaaccacgctgctcgatgccatttgtctggcgctgtatcacgaaacgccgcgc
ctctccaacgtttcgcaatcgcaaaatgacctgatgacccgcgatactgccgaatgtctg
gcggaagtggagtttgaagtgaaaggcgaggcctaccgcgcattctggagccagaaccgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgcaca
gacggtaaaatcctcgctgataaagtgaaagataagctggaaatgacggcgacgttaacc
gggctggattacggacgtttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctcaatgctaaaccgaaagaacgcgcagaattgctggaggagttaaccggcaccgaa
atttacgggcaaatctccgcgatggtctttgaacagcacaaatcggcccgcactgcgctg
gagaaactgcaagcgcaggccagcggcgttgcgttattagcacctgagcaggtgcaatca
ttaacagaaagtttgcaggtactcactgacgaagaaaagcagttactcgccgcacagcag
caagagcaacaatcgcttaactggttaacacgtctggatgaattacagcaggaggccagc
cgtcgtcagcaggctctgcaactggcgttgaccgaagaagaaaaagcgcaacctcaactg
gcggcgcttagtctggcacaacccgcacgaaatctccgtccgcactgggaacgtattgca
gaacactctacggcgctggcgcatactcgccaacagattgaagaagtaaatactcgctta
cagagcacaatggtgtttcgcgcgagcattcgtcaccaggcggcgaagcagtcggctgaa
ttacagcaccatcaacaaaccctgaatgcgtggttacaggaacacgaccgcttccgtcta
tggaacaacgagctggcgggttggcgtgcgcagttctcccaacaggccagtgaacgcggg
catctgcgacagtggcaacagcaattaacccatgcccggcaaaaacttaatgcccttccg
gctatctctttagctttaaccggcgatgaagttgctgtcgcacaagcgcaacatgctgaa
caacgcccgctacgtcagcgcctgattgcactgcatgggcaaattgctccccagcaaaaa
cggctggcgcagttacaagccactatccagagcgtcacgcaggaacagacgcaacgtaac
gccgcactgaccgaaatgcgccagcgttataaggaaaaaacgcaacagcttgccgacgtc
aaaaccatttgcgagcaggaagagcgcatcaaaacgctggaagcacagcgcgcacagtta
caagcaggtcaaccttgtccactttgtggttccaccagccacccggcggtagaggcgtat
caggcactggaacctggcgttaatcaggcccgattactgacgctggaaaacgaagtgaaa
aagctcggtgaagaaggcgcggcattacgtggacaactggacgcattaacctggcagctt
cagcgggatgaaaacgaagcacaaagcctccggcaagatgagcaagcacttactcaggaa
tggcagacactcactgccagcctcaatatcaccttgcagccgcaggacgatattcaaccg
tggcttaccgcccaggaagagcatgaaaagcaactgcaattactcaatcagcgtcaagaa
ttgcaggcgcaaattgccgcgcataatcagcaaattatccagtatcaacagcaaattgag
caacgccatcagcaactctctacggcattagcggattacgcgctggcattgccgaaggaa
gatgaagaagagagctggttatcggcacgtcagcaagaagcgcagatctggcaacagcgc
cagaacgaattaagcgggctgcaaaaccgcatccagcaactgacgccgattctggaaacg
ctgccgcaaagtgatgaacttccgcacagcgaagaaacggtgacgctggaaaactggcgg
caaattcacgagcaatgcctcgcgttacaaagccagcaacagacgttgcagcaacaggaa
gttctggcggcgcaaagtctgcaaaatgtccaggcacagtttgacgctgccctacaggcc
agcatttttgccgatcagcaagcgtttcttgcggcactgatggatgaacaaacactagcg
caactggaacagctcaagcagaatctggaaaaccagcgccgtcaggcacaaacgctggca
actcaggcggcagaagctctggcacagcatcagcaacaccagcctgacgggttggatctc
actttgacagcggaacagattcagcaagagttagcacaaactaaccaaaaactgcgtgaa
aataccacccatcagggcgagattcgccagcaactgaaacaggatgcagacaaccatcag
caacaacaaaccttaatgcagcaaattactcaaacgacacagcaggttgaggactggggt
tatcttaattcgctgattggctccaaagagggtgacaaattccgtaaattcgcccagggg
ctgacgctggataatctggtccatctcgctaatcagcaactgacccgtctgcacgggcgc
tatctgttaaagcgcaaagccagcgaggcgctggaagtcgaggttgtcgatacctggcag
gccgacgcggtgcgcgatacccgcaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcgctggcgctttcggatctggtcagccataaaacgcgtattgactcacttttc
cttgatgaaggtttcggcacgctggatagcgaaacgctggataccgcccttgatgcactg
gatgccctgaacgccagcggtaaaactatcggcgtaattagccacgttgaagcgatgaaa
gagcgtattcctgtgcaaatcaaagtgaagaagatcaacggtctgggctacagcaaactg
gacagcgcgtttgcagtgaaataa

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