KEGG   Elizabethkingia meningoseptica: BBD33_01550
Entry
BBD33_01550       CDS       T04744                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
emg  Elizabethkingia meningoseptica
Pathway
emg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:emg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBD33_01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emg03400]
    BBD33_01550
DNA repair and recombination proteins [BR:emg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBD33_01550
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: AQX04010
Position
321927..323729
AA seq 600 aa
MNSNLELQLKTLPQDPGVYRYYDKDNNLLYVGKAKNLKKRVLSYFNKNHGGYRTRIMVSK
IVRLETTIVNSEYDALLLENNLIKELNPYYNVMLKDDKTYPWICIKNEPFPRVFLTRNVI
KDGSEYYGPYAKPRQAKILIDTIKKIYKLRTCNLNLSPNKIDEGKYKVCLEYHIKNCLGP
CEGFESEEEYSEKIKAIRGIIKGDYKIARQYLTSQMMLFAEKMEFENAHTVKERLEILED
YQTHSMVVNAYIDDVDVFGMFSDESAAYVNYFKINNGSIVQSFTTEIKKVLEESDEEIME
EALVEIRQKFNSKSKEIYLPFHLSVEIPGAKIIVPKVGDKKRIVELSEKNAREYRLEKLK
QVQIVDPERHTNRIMAEMQKNLRMPVEPRHIEGFDNSNIQGTNPVSACVVFKDGKPSKQD
YRIFHVKTVEGPNDFATMEEVILRRYSRLLDEGEDLPQLILIDGGKGQLSSAVKSLKTLG
LYGKITIVGIAKRLEEIFFPEDPIPLYLDKKSETLKILQRVRDEAHRFGVKHHRTRRKNS
TIKSELEEIPGVGPKSIEVLLSKLKSVKRIRESSMETLEEILGKSKAKVIFEYFNGNENA
NT seq 1803 nt   +upstreamnt  +downstreamnt
gtgaattccaacctagaacttcagcttaaaacattaccacaggatcctggtgtttatcgt
tattatgataaagacaataacctgttatatgtaggtaaggcgaaaaacttaaaaaaaaga
gtcctttcctatttcaataaaaatcatggcggttaccgtacccgtattatggtatcgaaa
attgtacgcctggaaactacgattgtgaatagtgagtacgatgcccttttattagaaaac
aatcttattaaagagctcaatccttactacaatgtcatgctgaaggatgacaaaacctat
ccgtggatttgtattaaaaacgaaccatttcccagagtgtttcttacccggaatgttata
aaggatggttccgaatattatggaccttatgcaaaacccagacaggcaaagattcttatt
gatacaattaagaagatttataaactcagaacctgtaatctgaacctgagtcctaataaa
atagacgaaggcaagtataaagtatgtctggaataccacattaaaaattgtcttggtcct
tgtgaaggctttgaatctgaagaagaatacagtgaaaaaattaaagcaatccgcggaatt
ataaagggtgattataaaatcgccagacaatatctgacttcgcaaatgatgctttttgcc
gagaaaatggagtttgaaaatgcccatactgttaaagaaagactggaaatcctagaggat
tatcagacccatagtatggttgtgaatgcttatatagatgacgtggatgtatttggcatg
ttctcggatgagtctgcggcttatgtcaactatttcaaaattaacaacggttctattgtt
cagtcttttacaacggaaataaaaaaagtgctggaagaaagtgatgaagagattatggaa
gaagctctggttgaaatacgccagaagtttaactccaaatctaaagagatctatttaccg
tttcatctttccgtagaaattcccggggcaaaaattattgttccgaaagtaggtgataaa
aaacgcatcgttgaactttcagagaaaaatgcccgtgagtaccgtctggaaaaactaaaa
caagtacagattgtcgatcctgaaagacataccaaccgtattatggccgaaatgcaaaag
aatctgcgcatgccggttgaaccacgacatatagaaggttttgataattccaatattcag
ggaacaaatcctgtatctgcatgtgttgtatttaaagacggcaaacccagcaaacaggat
taccgtatattccatgtaaaaacagtagaaggtccaaatgactttgctactatggaagaa
gttattcttcgccggtacagccgtttgttagatgagggagaagatctgcctcagcttatt
ctgatcgatggtgggaaaggacagttgagctccgctgtaaaaagtctgaaaaccttaggc
ctgtatggtaaaattacaatcgtaggtatcgccaaaagattggaagaaatattctttcct
gaagatcctattcctttatatctggataaaaaatccgaaactctaaaaatattacaacgt
gtgcgggatgaggcccaccgttttggtgttaaacatcaccggacaagaaggaaaaactca
acaataaaatccgaactggaagaaattccgggtgtaggacctaaaagtattgaagtactt
ctgtcaaaattaaaatcggtaaagcgtatccgagagtccagtatggaaacccttgaagag
atattaggtaaaagtaaagctaaagtaatcttcgaatactttaacggaaacgaaaatgcg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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