KEGG   Endosymbiont of unidentified scaly snail isolate Monju: EBS_0130
Entry
EBS_0130          CDS       T04530                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
enm  Endosymbiont of unidentified scaly snail isolate Monju
Pathway
enm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:enm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EBS_0130 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:enm03021]
    EBS_0130 (rho)
   03019 Messenger RNA biogenesis [BR:enm03019]
    EBS_0130 (rho)
Transcription machinery [BR:enm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EBS_0130 (rho)
Messenger RNA biogenesis [BR:enm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EBS_0130 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 AAA SAP
Other DBs
NCBI-ProteinID: BAN68118
UniProt: S6B9M8
Position
142294..143556
AA seq 420 aa
MNLTELKKMPVPELQALASSMKIDNMGRSRKQDLIFAILKAHAKKGEDIYGDGVLEILQD
GFGFLRSEDSSYLAGPDDIYVSPSQIRRFGLRTGDTISGKIRPPKDNERYFALLKVDEIN
FDRPENAKNKILFENFTPLFPNKKFNLELGNGSTEDITARTIELVAPIGKGQRGLIVAPP
KAGKTMLIQNIAQSIAINHPECYLIVLLIDERPEEVTEMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALQKPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMEVHLDRRIAEKRIFPAIHI
NRSGTRREELLIPEKELQKIWILRKILHPMDELAAMEFLYDKLKATKTNQEFFDAMKSKA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaacctcactgaactcaagaagatgcccgttcccgagctgcaggctctcgccagctcg
atgaaaatcgacaacatgggtcgctcgcgcaagcaggacctgatattcgccatcctcaag
gcgcatgccaagaagggtgaggacatctatggtgatggcgtgctcgagatcctgcaggat
ggcttcggtttcctgcgctcggaagactcgtcctacctggccgggcccgacgatatctat
gtctcgcccagccagatccgtcgtttcggcctgcgtaccggcgacaccatctccggcaag
atccgtccgcccaaggacaacgagcgctactttgccctgctcaaggtcgacgagatcaac
ttcgatcgtcccgagaacgccaagaacaagatcctgttcgagaacttcacccccctgttc
cccaacaagaagttcaacctggaactgggcaatggcagcaccgaggacattaccgcgcgt
accatcgagctggtggcgcccatcggcaagggtcagcgcggcctgatcgtggccccgccc
aaggcgggcaagaccatgctcatccagaacatcgcccagtcgatcgccatcaaccatccc
gagtgctatctgatcgtgctgctgatcgatgaacggccggaggaggtcaccgagatggcc
cgctcggtgcgcggcgaggtgatctcgtcgaccttcgacgagccggccacccgccacgtg
caggtcgccgagatggtcattgaaaaggccaaacgcctggtcgagcacaagcgcgacgtg
gtgatcctgctcgactccatcacccgcctggcgcgtgcctacaacaccgtgatcccttcg
tccggcaaggtgctcaccggcggcgtggacgccaatgccctgcagaagcccaagcgcttc
ttcggcgcggcgcgcaacgtcgaggagggcggctcgctgaccatcatcgccaccgccctg
gtggagaccggctcgcgcatggacgacgtgatctacgaggagttcaagggcaccggcaac
atggaggttcacctcgaccggcgcattgccgagaagcgcatcttcccggccatccacatc
aaccgctccggcactcgccgcgaggagctgctgattcccgagaaggaactgcagaagatc
tggatcctgcgcaagatcctgcaccccatggatgaactcgcggccatggaattcctctac
gacaagctcaaggcgaccaagaccaaccaggaattcttcgacgccatgaagtccaaggcc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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