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Entry
EC 3.1.13.5                 Enzyme                                 

Name
ribonuclease D;
RNase D
Class
Hydrolases;
Acting on ester bonds;
Exoribonucleases producing 5'-phosphomonoesters
BRITE hierarchy
Reaction(IUBMB)
Exonucleolytic cleavage that removes extra residues from the 3'-terminus of tRNA to produce 5'-mononucleotides
Comment
Requires divalent cations for activity (Mg2+, Mn2+ or Co2+). Alteration of the 3'-terminal base has no effect on the rate of hydrolysis whereas modification of the 3'-terminal sugar has a major effect. tRNA terminating with a 3'-phosphate is completely inactive [3]. This enzyme can convert a tRNA precursor into a mature tRNA [2].
History
EC 3.1.13.5 created 2006
Orthology
K03684  ribonuclease D
Genes
ECO: b1804(rnd)
ECJ: JW1793(rnd)
ECD: ECDH10B_1942(rnd)
EBW: BWG_1617(rnd)
ECOK: ECMDS42_1478(rnd)
ECE: Z2847(rnd)
ECS: ECs2513
ECF: ECH74115_2530(rnd)
ETW: ECSP_2376(rnd)
ELX: CDCO157_2347
EOJ: ECO26_2573(rnd)
EOI: ECO111_2310(rnd)
EOH: ECO103_1993(rnd)
ECOO: ECRM13514_2307(rnd)
ECOH: ECRM13516_2209(rnd)
ECG: E2348C_1927(rnd)
EOK: G2583_2251(rnd)
ESO: O3O_14695
ESM: O3M_10900
ESL: O3K_10930
ECW: EcE24377A_2030(rnd)
ELH: ETEC_1836
EUN: UMNK88_2274(rnd)
ECC: c2208(rnd)
ECP: ECP_1747
ECI: UTI89_C1998(rnd)
ECV: APECO1_862(rnd)
ECX: EcHS_A1892(rnd)
ECM: EcSMS35_1384(rnd)
ECY: ECSE_1978
ECR: ECIAI1_1873(rnd)
ECQ: ECED1_2007(rnd)
ECK: EC55989_1977(rnd)
ECT: ECIAI39_1249(rnd)
EOC: CE10_2086(rnd)
EUM: ECUMN_2096(rnd)
ECZ: ECS88_1856(rnd)
ELO: EC042_1969(rnd)
ESE: ECSF_1660
EBR: ECB_01774(rnd)
EBD: ECBD_1838
EKF: KO11_13695(rnd)
EAB: ECABU_c20620(rnd)
EDJ: ECDH1ME8569_1748(rnd)
EIH: ECOK1_1921(rnd)
ENA: ECNA114_1850(rnd)
ELW: ECW_m1973(rnd)
ELL: WFL_09695(rnd)
ELC: i14_2028(rnd)
ELD: i02_2028(rnd)
EBL: ECD_01774(rnd)
EBE: B21_01762(rnd)
ELF: LF82_1908(rnd)
ECOI: ECOPMV1_01896(rnd)
ECOJ: P423_09570
ECOS: EC958_2022
EFE: EFER_1276(rnd)
EAL: EAKF1_ch4247(rnd)
STY: STY1947(rnd)
STT: t1060(rnd)
STM: STM1817(rnd)
SEO: STM14_2196(rnd)
SEY: SL1344_1745(rnd)
SEJ: STMUK_1789(rnd)
SEB: STM474_1838(rnd)
SEF: UMN798_1912(rnd)
SENR: STMDT2_17371(rnd)
SEND: DT104_17851(rnd)
SENI: CY43_09280
SPT: SPA1056(rnd)
SEK: SSPA0986
SEI: SPC_1913(rnd)
SEC: SCH_1810(rnd)
SEH: SeHA_C2016(rnd)
SHB: SU5_02420
SEE: SNSL254_A1956(rnd)
SEW: SeSA_A1959(rnd)
SEA: SeAg_B1316(rnd)
SENS: Q786_06100
SED: SeD_A1500(rnd)
SEG: SG1300(rnd)
SEL: SPUL_1634(rnd)
SEGA: SPUCDC_1634(rnd)
SET: SEN1220(rnd)
SENA: AU38_06270
SENO: AU37_06265
SENV: AU39_06265
SENQ: AU40_07075
SENL: IY59_06435
SEEP: I137_07380
SENB: BN855_18750(rnd)
SENE: IA1_09025
SBG: SBG_1674(rnd)
SBZ: A464_1918
SFL: SF1424(rnd)
SFX: S1539(rnd)
SFV: SFV_1425(rnd)
SFE: SFxv_1612(rnd)
SFN: SFy_2038
SFS: SFyv_2089
SFT: NCTC1_01525(rnd)
SSN: SSON_1357(rnd)
SBO: SBO_1284(rnd)
SBC: SbBS512_E2064(rnd)
SDY: SDY_1708(rnd)
ENC: ECL_01500
ECLO: ENC_06930
EEC: EcWSU1_02728(rnd)
ECLX: LI66_13020
ECLY: LI62_14710
ECLZ: LI64_12760
ENF: AKI40_3518(rnd)
ESA: ESA_01456
CSK: ES15_1658(rnd)
CTU: CTU_24800(rnd)
KPN: KPN_02321(rnd)
KPU: KP1_3446(rnd)
KPP: A79E_1912
KPT: VK055_0129(rnd)
KPE: KPK_1972(rnd)
KPR: KPR_3233(rnd)
KPJ: N559_1943
KPX: PMK1_04683(rnd)
KPNU: LI86_09675
KPNK: BN49_3426(rnd)
KVA: Kvar_1868
KOX: KOX_23555
KOE: A225_3601
EAE: EAE_22545
EAR: CCG29494
CKO: CKO_01177
CRO: ROD_18431(rnd)
CAMA: F384_08695
HDE: HDEF_0515(rnd)
EBF: D782_1839
PSTS: E05_15450
YPE: YPO2075(rnd)
YPK: y2235(rnd)
YPH: YPC_2237(rnd)
YPA: YPA_1458
YPN: YPN_1552
YPM: YP_1918(rnd)
YPG: YpAngola_A2402(rnd)
YPZ: YPZ3_1749(rnd)
YPD: YPD4_1835(rnd)
YPX: YPD8_1715(rnd)
YPW: CH59_4047(rnd)
YPJ: CH55_660(rnd)
YPV: BZ15_1461(rnd)
YPL: CH46_3035(rnd)
YPS: YPTB2058(rnd)
YPO: BZ17_406(rnd)
YPI: YpsIP31758_2013(rnd)
YPY: YPK_2124
YPB: YPTS_2119
YPQ: DJ40_249(rnd)
YPU: BZ21_1338(rnd)
YPR: BZ20_53(rnd)
YPC: BZ23_1620(rnd)
YPF: BZ19_1414(rnd)
YEN: YE2374(rnd)
YEY: Y11_11621
YEW: CH47_1727(rnd)
YET: CH48_3547(rnd)
YEE: YE5303_16791(rnd)
YAL: AT01_569(rnd)
YFR: AW19_1059(rnd)
YIN: CH53_3820(rnd)
YKR: CH54_603(rnd)
YRO: CH64_423(rnd)
YRU: BD65_201(rnd)
SPE: Spro_2759
SRL: SOD_c26000(rnd)
SPLY: Q5A_014405(rnd)
SMAF: D781_2502
SMW: SMWW4_v1c27720(rnd)
SMAR: SM39_2231(rnd)
SMAC: SMDB11_2026(rnd)
SERF: L085_14960
RAA: Q7S_10185
ECA: ECA2371(rnd)
PATR: EV46_11415
PATO: GZ59_21870(rnd)
PCT: PC1_1937
PEC: W5S_2173
SGL: SG1333
SOD: Sant_1794(rnd)
DDD: Dda3937_02918(rnd)
DDQ: DDI_2074
ETA: ETA_15340(rnd)
EPY: EpC_16120(rnd)
EPR: EPYR_01733(rnd)
EAM: EAMY_2003(rnd)
EAY: EAM_1955(rnd)
EBI: EbC_24440(rnd)
ERJ: EJP617_30860(rnd)
EGE: EM595_2034(rnd)
PAM: PANA_2132(rnd)
PLF: PANA5342_2039(rnd)
PAJ: PAJ_1452(rnd)
PVA: Pvag_1574(rnd)
PSTW: DSJ_14920
TPTY: NCTC11468_02076(rnd)
PLU: plu2135(rnd)
PAY: PAU_02432(rnd)
PMR: PMI1167(rnd)
PMIB: BB2000_1173(rnd)
XBO: XBJ1_2398(rnd)
XBV: XBW1_1963(rnd)
XNE: XNC1_2185(rnd)
XNM: XNC2_2114(rnd)
XDO: XDD1_2085(rnd)
XPO: XPG1_1791(rnd)
PSI: S70_20385
PSX: DR96_2977(rnd)
PRG: RB151_021110(rnd)
PHEI: NCTC12003_02150(rnd)
MMK: MU9_2089
ETR: ETAE_1460(rnd)
ETD: ETAF_1355
ETE: ETEE_3460
LRI: NCTC12151_01968(rnd)
PSHI: SAMEA2665130_2131(rnd)
HIN: HI0390(rnd)
HIT: NTHI0511(rnd)
HIU: HIB_05020
HIE: R2846_0187(rnd)
HIZ: R2866_0182(rnd)
HIK: HifGL_001721(rnd)
HIA: H733_0285
HIW: NTHI477_01505(rnd)
HIC: NTHIC486_00595(rnd)
HIX: NTHI723_01296(rnd)
HDU: HD_1478(rnd)
HAP: HAPS_0391(rnd)
HPAZ: K756_04565
HPAS: JL26_04085
HPAK: JT17_01630
HSO: HS_0736(rnd)
HSM: HSM_1203
PMU: PM0706(rnd)
PMV: PMCN06_0765(rnd)
PMP: Pmu_07720(rnd)
PMUL: DR93_1536(rnd)
PDAG: 4362423_00698(rnd)
MSU: MS1357(rnd)
MHT: D648_12690(rnd)
MHQ: D650_10900(rnd)
MHAT: B824_13620(rnd)
MHX: MHH_c20760(rnd)
MHAE: F382_01180
MHAM: J450_00630
MHAO: J451_02160
MHAL: N220_07000
MHAQ: WC39_07250
MHAY: VK67_07250
MVG: X874_9580
APL: APL_0616(rnd)
APJ: APJL_0611(rnd)
APA: APP7_0662(rnd)
ASU: Asuc_1111
APOR: DDU33_08480(rnd)
AAT: D11S_1677
AAN: D7S_02417
AACN: AANUM_1650
BTO: WQG_11200
BTRE: F542_10860
BTRH: F543_12290
BTRA: F544_11570
XFA: XF_0751
XFT: PD_1904(rnd)
XCC: XCC2306(rnD)
XCB: XC_1809
XCP: XCR_2578(rnd)
XCV: XCV2611(rnd)
XAX: XACM_2419(rnD)
XAC: XAC2413(rnD)
XCI: XCAW_02079(rnd)
XOO: XOO2742(rnD)
XOM: XOO2586(XOO2586)
XOP: PXO_00420(rnd)
XOR: XOC_2086(rnd)
XAL: XALC_2081(rnd)
XPH: XppCFBP6546_00920(XppCFBP6546P_00920)
XVA: C7V42_10085(rnd)
SML: Smlt3338(rnd)
SMT: Smal_2762
SMZ: SMD_2908(rnd)
SACZ: AOT14_15590(rnd)
STEN: CCR98_14335(rnd)
STEM: CLM74_14635(rnd)
PSUW: WQ53_00515
PSD: DSC_08155
LAB: LA76x_3307(rnd)
LAQ: GLA29479_4839(rnd)
LCP: LC55x_3341(rnd)
LGU: LG3211_1858(rnd)
LEZ: GLE_1802(rnd)
LEM: LEN_3176(rnd)
LYT: DWG18_08265(rnd)
LUM: CNR27_10485(rnd)
LUE: DCD74_05505(rnd)
DKO: I596_2567
VCH: VC1984
VCS: MS6_1740
VCE: Vch1786_I1475(rnd)
VCI: O3Y_09580
VCO: VC0395_A1569(rnd)
VCR: VC395_2099(rnd)
VCM: VCM66_1908(rnd)
VCX: VAA049_896(rnd)
VCZ: VAB027_2619(rnd)
VVU: VV1_0135(rnd)
VVY: VV1054
VPA: VP0871
VPB: VPBB_0825
VAG: N646_3024
VDB: AL552_12740(rnd)
VHR: AL538_13870(rnd)
VSP: VS_2219
VNI: VIBNI_A2525(rnd)
VAN: VAA_02329
VAU: VANGNB10_cI0950(rnd)
VFL: AL536_15725(rnd)
VMI: AL543_19185(rnd)
VQI: CCZ37_08205(rnd)
VTA: A2057(rnd)
VFI: VF_1707(rnd)
VFM: VFMJ11_1833(rnd)
VSA: VSAL_I1064(rnd)
AWD: AWOD_I_1825(rnd)
PPR: PBPRA1076(RND)
GHO: AL542_04345(rnd)
PAE: PA1294(rnd)
PAEV: N297_1334(rnd)
PAEI: N296_1334(rnd)
PAU: PA14_47460(rnd)
PAP: PSPA7_4097(rnd)
PAG: PLES_38881(rnd)
PAF: PAM18_3609(rnd)
PNC: NCGM2_2180(rnd)
PAEB: NCGM1900_5279(rnd)
PAEP: PA1S_19435
PAEM: U769_19280
PAEL: T223_19885
PAEU: BN889_01396(rnd)
PAEG: AI22_15165
PAEC: M802_1331(rnd)
PAEO: M801_1333(rnd)
PMY: Pmen_1773
PMK: MDS_3088
PRE: PCA10_18440(rnd)
PPSE: BN5_1606
PCQ: PcP3B5_44700(rnd)
PPU: PP_4591(rnd)
PPF: Pput_1297
PPT: PPS_3951
PPB: PPUBIRD1_1307(rnd)
PPI: YSA_07722
PPX: T1E_3135(rnd)
PPUH: B479_19640
PPUT: L483_25060
PPUN: PP4_12090(rnd)
PPUD: DW66_4389
PMON: X969_19290
PMOT: X970_18925
PST: PSPTO_3922(rnd)
PSB: Psyr_1563
PSYR: N018_18420
PSP: PSPPH_1547(rnd)
PAMG: BKM19_010255(rnd)
PAVL: BKM03_09380(rnd)
PFL: PFL_1495(rnd)
PPRC: PFLCHA0_c15340(rnd)
PPRO: PPC_1548
PFS: PFLU_1516
PFC: PflA506_1532(rnd)
PFW: PF1751_v1c15000(rnd)
PFB: VO64_4654
PMAN: OU5_1960
PEN: PSEEN4035(rnd)
PSA: PST_1363(rnd)
PSR: PSTAA_1395(rnd)
PSTT: CH92_07790
PPUU: PputUW4_01299(rnd)
PKC: PKB_4050(rnd)
PSES: PSCI_3293
PSEM: TO66_07375
PSEC: CCOS191_3983(rnd)
PSOS: POS17_1506
PANR: A7J50_1639
PSET: THL1_1838
PSIL: PMA3_22350
AVN: Avin_32970(rnd)
AVL: AvCA_32970(rnd)
AVD: AvCA6_32970(rnd)
ACX: Achr_16350(rnd)
PAR: Psyc_0795(rnd)
PALI: A3K91_1773
PSYC: DABAL43B_0957(rnd)
PSYA: AOT82_819
ACB: A1S_1686
ABM: ABSDF1916(rnd)
ABY: ABAYE1965(rnd)
ABN: AB57_1911
ABX: ABK1_2179
ABH: M3Q_2071
ABAD: ABD1_16770(rnd)
ABAZ: P795_8805
ABAU: IX87_19305
ABAA: IX88_10380
ACC: BDGL_001043(rnd)
ACI: ACIAD2310(rnd)
ASJ: AsACE_CH01581(rnd)
MCT: MCR_0843(rnd)
MCS: DR90_1034
MCAT: MC25239_00849(rnd)
SON: SO_2580(rnd)
SDN: Sden_1626
SFR: Sfri_1734
SAZ: Sama_1933
SBL: Sbal_1865
SLO: Shew_2187
SSE: Ssed_2522
SPL: Spea_2447
SHL: Shal_1833
SWD: Swoo_2111
SWP: swp_2290
SVO: SVI_2470(rnd)
SHF: CEQ32_03885(rnd)
SPSW: Sps_01288
SBJ: CF168_09075(rnd)
SMAV: CFF01_08285(rnd)
SHEW: CKQ84_18075(rnd)
ILO: IL1826(rnd)
IPI: CEW91_03980(rnd)
IDI: CWC33_09480(rnd)
IDT: C5610_09040(rnd)
CPS: CPS_3518(rnd)
COLA: DBO93_11005(rnd)
PHA: PSHAb0503(rnd)
PAT: Patl_2803
PSM: PSM_B0584(rnd)
PSEO: OM33_18740
PTN: PTRA_b0718(rnd)
PPIS: B1L02_20420(rnd)
PEA: PESP_b0789(rnd)
PSPO: PSPO_b0841(rnd)
PART: PARC_b0763(rnd)
PTU: PTUN_b0844(rnd)
PNG: PNIG_b0679(rnd)
PTD: PTET_b0718(rnd)
PSEN: PNC201_19255(rnd)
MAQ: Maqu_1610
MHC: MARHY1674(rnd)
MAD: HP15_1882(rnd)
MBS: MRBBS_2162(rnd)
AMAL: I607_12210
AMAE: I876_12585
AMAO: I634_12440
AMAD: I636_12580
AMAI: I635_12945
AMAG: I533_12190
AMAC: MASE_11980
AAUS: EP12_12810
ASP: AOR13_972
GNI: GNIT_2221(rnd)
GPS: C427_2743
CATE: C2869_13875(rnd)
SALM: D0Y50_12435(rnd)
PIN: Ping_1668
FBL: Fbal_1720
MVS: MVIS_2271(rnd)
MYA: MORIYA_0814(rnd)
CJA: CJA_2438(rnd)
SDE: Sde_1338
TTU: TERTU_2739(rnd)
SAGA: M5M_18130
MICC: AUP74_00123(rnd)
MII: BTJ40_04015(rnd)
MCA: MCA2378(rnd)
MPSY: CEK71_12185(rnd)
FTU: FTT_0776c(rnd)
FTQ: RO31_0892
FTF: FTF0776c(rnd)
FTW: FTW_1462
FTT: FTV_0733(rnd)
FTG: FTU_0817(rnd)
FTL: FTL_1449
FTH: FTH_1411(rnd)
FTA: FTA_1536
FTS: F92_08075
FTI: FTS_1422(rnd)
FTC: DA46_1300
FTV: CH67_1848
FTZ: CH68_1577
FTM: FTM_1312(rnd)
FTN: FTN_0679(rnd)
FTX: AW25_1345
FTD: AS84_1863
FTY: CH70_1369
FPH: Fphi_1866
FPT: BZ13_136
FPI: BF30_126
FPM: LA56_325
FPX: KU46_1426
FPZ: LA55_885
FPJ: LA02_1596
FNA: OOM_1418
TCX: Tcr_1582
MEJ: Q7A_982(rnd)
MEC: Q7C_897
CYQ: Q91_0237(rnd)
CYY: CPC19_00205(rnd)
TEE: Tel_03120
TGR: Tgr7_0509
TKM: TK90_0326
TNI: TVNIR_2690(rnd_[H])
TVR: TVD_12175
GAI: IMCC3135_22255(rnd)
HCH: HCH_02616(rnd)
CSA: Csal_1461
HEL: HELO_2058(rnd)
HAM: HALO1875
HCO: LOKO_02606(rnd)
HHH: CLM76_12805(rnd)
HBE: BEI_2286(rnd)
HAF: C8233_14850(rnd)
ABO: ABO_1768(rnd)
ADI: B5T_02999(rnd)
APAC: S7S_10825
AXE: P40_13925
KAK: Kalk_20490(rnd)
KKO: Kkor_1398
KGE: TQ33_1125
TOL: TOL_1588
OAI: OLEAN_C21090(rnd)
BSAN: CHH28_13885(rnd)
AHA: AHA_2205(rnd)
ASA: ASA_2094(rnd)
AVR: B565_1888
AMED: B224_2221
ASR: WL1483_476(rnd)
ADH: CK627_14800(rnd)
ACAV: VI35_10595(rnd)
AEM: CK911_06525(rnd)
AEA: C2U39_10645(rnd)
ARV: C7N77_14465(rnd)
TAU: Tola_1564
OCE: GU3_10045
DNO: DNO_1123(rnd)
SOK: D0B54_17340(rnd)
SLIM: SCL_0036
SVA: SVA_0027
ACII: C4901_16880(rnd)
SALN: SALB1_2281
TBN: TBH_C0200
EBH: BSEPE_1039(rnd)
GPB: HDN1F_33610(rnd)
ENM: EBS_0551(rnd)
PLG: NCTC10937_01573(rnd)
GSU: GSU0443
GME: Gmet_3389
GUR: Gura_4287
GLO: Glov_3636
GBM: Gbem_0237
GEO: Geob_0415
GEM: GM21_0221
GEB: GM18_0266
PCA: Pcar_0323
PPD: Ppro_3617
DEU: DBW_0517
DPS: DP2797
DSF: UWK_02553
DOL: Dole_3191
DML: Dmul_34200(rnd)
DAL: Dalk_1956
DAT: HRM2_37670(rnd)
DTO: TOL2_C08850(rnd)
ADE: Adeh_1602
MXA: MXAN_5981
CCX: COCOR_06526(rnd)
SCL: sce4245(rnd)
HOH: Hoch_6686
SAT: SYN_02700
SFU: Sfum_0414
RPR: RP422 RP462
RPQ: rpr22_CDS412(rnd2) rpr22_CDS452(rnd)
RTY: RT0408(rnd1) RT0449(rnd2)
RBE: RBE_0690(rnd) RBE_0748(rnd2)
RCO: RC0587(rnd2) RC0696(rnd)
RFE: RF_0653(rnd2) RF_0809(rnd)
RMS: RMA_0603(rnd2) RMA_0788(rnd)
RAF: RAF_ORF0547(rnd2) RAF_ORF0706(rnd)
RJA: RJP_0453(rnd2) RJP_0558(rnd)
RSV: Rsl_685(rnd2) Rsl_884(rnd)
RMC: RMONA_04930(rnd_1) RMONA_05145(rnd_2)
OTS: OTBS_0265(rnd)
OTT: OTT_1388(rnd)
WCL: WCLE_007410(rnd) WCLE_007780(rnd)
AMA: AM1015(rnd) AM151(rnd)
AMF: AMF_111(rnd) AMF_774(rnd)
NSE: NSE_0529
NRI: NRI_0506
NHM: NHE_0507
MMN: midi_01015(rnd)
AMIH: CO731_00249(rnd_1) CO731_03986(rnd_2)
SME: SMc00342 SMc00622(rnd)
SMX: SM11_chr2473(rnd) SM11_chr3739(rnd2)
SMEL: SM2011_c00342(rnd2) SM2011_c00622(rnd1)
EAD: OV14_1127 OV14_2221(rnd)
ATU: Atu1151(rnd) Atu4108(rnd)
ARA: Arad_0140(rnd1) Arad_1732(rnd)
ATF: Ach5_10650(rnd) Ach5_38870(rnd)
AVI: Avi_0120(rnd) Avi_1588(rnd)
RET: RHE_CH00095(rnd1) RHE_CH01495(rnd2)
RLE: RL0104 RL1603(rnd)
RHL: LPU83_0161(rnd1) LPU83_1451(rnd)
RHT: NT26_1173(rnd) NT26_4020
LAA: WSI_02780
LSO: CKC_02110
LAR: lam_009(rnd)
BMEL: DK63_1661 DK63_207(rnd)
BMEE: DK62_1288 DK62_654(rnd)
BABO: DK55_138 DK55_771(rnd)
BABR: DO74_1118(rnd) DO74_1744
BABT: DK49_1987 DK49_529(rnd)
BABB: DK48_1347(rnd) DK48_1988
BABU: DK53_133 DK53_755(rnd)
BABS: DK51_1330 DK51_702(rnd)
BABC: DO78_49 DO78_676(rnd)
BMS: BR0120 BR0750(rnd)
BSZ: DK67_1662(rnd) DK67_75
BOV: BOV_0117 BOV_0744(rnd)
BCAR: DK60_227 DK60_818(rnd)
BMR: BMI_I123 BMI_I748(rnd)
BPP: BPI_I121 BPI_I787(rnd)
BPV: DK65_1244 DK65_612(rnd)
OAH: DR92_112 DR92_1999(rnd)
BJA: bll4135(rnd) blr0719
BRA: BRADO0117 BRADO3356(rnd)
BBT: BBta_0125 BBta_3861(rnd)
BRS: S23_01140 S23_41270(rnd)
RPA: RPA0046 RPA3045(rnd)
OCA: OCAR_4455 OCAR_6337(rnd)
VGO: GJW-30_1_02315(rnd_1) GJW-30_1_03486(rnd_2)
BHE: BH02530(rnd1) BH09800(rnd2)
BQU: BQ02390(rnd1) BQ07560(rnd2)
BTR: BT_0277(rnd1) BT_1359(rnd2)
BGR: Bgr_02600 Bgr_12070(rnd)
BCD: BARCL_0193(rnd) BARCL_0685(rnd)
MDI: METDI3225 METDI3683(rnd)
MOR: MOC_0662(rnd) MOC_5835
MAQU: Maq22A_1p37430(rnd) Maq22A_c07355(rnd)
MMED: Mame_01499(rnd_1) Mame_03637(rnd_2)
HDI: HDIA_0193(rnd_1) HDIA_2455(rnd_2)
SIL: SPO0083 SPO2167(rnd)
RSP: RSP_1152(rnd1) RSP_1971(rnd)
RCP: RCAP_rcc00113(rnd1) RCAP_rcc01490(rnd2)
RDE: RD1_0367 RD1_2254(rnd)
KVU: EIO_1283(rnd) EIO_2685
KVL: KVU_0783(rnd) KVU_2186
KRO: BVG79_00984(rnd) BVG79_02286(rnd)
PSF: PSE_0695 PSE_2771(rnd)
OTM: OSB_17820(rnd_1) OSB_31370(rnd_2)
HNE: HNE_2258(rnd)
ZMR: A254_00575(rnd_1) A254_00967
SJP: SJA_C1-31260(rnd) SJA_C1-32920(rnd)
SSY: SLG_15080(rnd) SLG_37920
SPHR: BSY17_1252(rnd) BSY17_881
BLAS: BSY18_3420 BSY18_708(rnd)
AAY: WYH_00803(rnd_1) WYH_02112(rnd_2)
ANH: A6F65_00598(rnd_1) A6F65_01943(rnd_2)
ADO: A6F68_00340(rnd_1) A6F68_02531(rnd_2)
GDI: GDI0699(rnd) GDI2114(rnd)
APK: APA386B_1610(rnd) APA386B_2188(rnd)
ASZ: ASN_1470(rnd) ASN_2903(rnd)
RCE: RC1_1541(rnd) RC1_3199
MAGX: XM1_1423 XM1_3691(rnd)
AZL: AZL_001040(rnd) AZL_016280(rnd)
THAL: A1OE_1283(rnd) A1OE_1519
EFK: P856_688(rnd) P856_806(rnd_2)
MGM: Mmc1_0327
PUB: SAR11_0498(rnd)
CAC: CA_C1909(rnd)
CAE: SMB_G1937(rnd)
CAY: CEA_G1924(rnd)
MTU: Rv2681
MTV: RVBD_2681
MTC: MT2755
MRA: MRA_2709
MTUR: CFBS_2833
MTD: UDA_2681
MTUH: I917_18840
MTUL: TBHG_02617
MTUT: HKBT1_2824
MTUU: HKBT2_2827
MBB: BCG_2694
MBT: JTY_2688
MBX: BCGT_2513
MAF: MAF_26850
MMIC: RN08_2966
MLE: ML1040
MLB: MLBr01040
MPA: MAP_2802
MAO: MAP4_1010
MAVI: RC58_04970
MAVU: RE97_04965
MAV: MAV_3576
MIT: OCO_34070
MIA: OCU_34090
MID: MIP_05130
MYO: OEM_34450
MIR: OCQ_35290
MLP: MLM_1541
MUL: MUL_3315
MJL: Mjls_2199
MMI: MMAR_2035
MMM: W7S_17040
MHAD: B586_14420
MVA: Mvan_2479
MGI: Mflv_3921
MPHL: MPHLCCUG_03084(rnd)
MVQ: MYVA_2372
MTHN: 4412656_02706(rnd)
MAB: MAB_2988
MABB: MASS_2923
MCHE: BB28_15015
MSTE: MSTE_02953
MTER: 4434518_02358(rnd)
ASD: AS9A_1777
CGL: NCgl1826(Cgl1901)
CGB: cg2081(rnd)
CGU: WA5_1826(Rnd)
CGT: cgR_1730
CGM: cgp_2081(rnd)
CGJ: AR0_08945
CEF: CE1795
CDI: DIP1396
CDP: CD241_1341(rnd)
CDH: CDB402_1307(rnd)
CDT: CDHC01_1340(rnd)
CDE: CDHC02_1297(rnd)
CDR: CDHC03_1318(rnd)
CDA: CDHC04_1318(rnd)
CDZ: CD31A_1413(rnd)
CDB: CDBH8_1390(rnd)
CDS: CDC7B_1400(rnd)
CDD: CDCE8392_1314(rnd)
CDW: CDPW8_1386(rnd)
CDV: CDVA01_1281(rnd)
CDIP: ERS451417_01419(rnd)
CJK: jk1077(rnd)
CAR: cauri_1443(rnd)
CPU: cpfrc_01199(rnd)
CPL: Cp3995_1224(rnd)
CPG: Cp316_1247(rnd)
CPP: CpP54B96_1218(rnd)
CPK: Cp1002_1195(rnd)
CPQ: CpC231_1194(rnd)
CPX: CpI19_1201(rnd)
CPZ: CpPAT10_1193(rnd)
COR: Cp267_1252(rnd)
COP: Cp31_1209(rnd)
COD: Cp106_1177(rnd)
COS: Cp4202_1187(rnd)
COI: CpCIP5297_1217(rnd)
COE: Cp258_1215(rnd)
COU: Cp162_1194(rnd)
CPSE: CPTA_01773
CPSU: CPTB_01990
CPSF: CPTC_01764
CRD: CRES_1168(rnd)
CUL: CULC22_01308(rnd)
CUC: CULC809_01294(rnd)
CUE: CULC0102_1423(rnd)
CVA: CVAR_1570
CTER: A606_06235
CGY: CGLY_08055(rnd)
COA: DR71_2107
CSX: CSING_07895(rnd)
CKU: UL82_05985(rnd)
CCJ: UL81_06780(rnd)
CSP: WM42_2536
CPHO: CPHO_05310
CGV: CGLAU_07165(rnd)
CAMG: CAMM_06140
CMIN: NCTC10288_01058(rnd)
NFA: NFA_37400(rnd)
NFR: ERS450000_00160(rnd)
RER: RER_28440(rnd)
REY: O5Y_13100
ROP: ROP_68390
REQ: REQ_20540
RHB: NY08_1203
RFA: A3L23_04448(rnd)
RHS: A3Q41_03819(rnd)
RHU: A3Q40_01536(rnd)
RRT: 4535765_02088(rnd)
GBR: Gbro_2261
GOR: KTR9_2178
TPR: Tpau_1890
SRT: Srot_1921
SCO: SCO6028(SC1C3.16c)
SALB: XNR_0765
SMA: SAVERM_2231(rnd)
SGR: SGR_1476
SGB: WQO_27860
SCT: SCAT_4685
SFA: Sfla_1216
SBH: SBI_03089
SHY: SHJG_7093
SVE: SVEN_5826
SALS: SLNWT_0811
STRP: F750_5619
SFI: SFUL_5991
SALU: DC74_6064
STRE: GZL_02786
SLD: T261_2037
STRM: M444_26485
SPRI: SPRI_1789
SRW: TUE45_06635(rnd)
SLE: sle_16800(sle_16800)
SRN: A4G23_04642(rnd)
STRD: NI25_09240
SMAL: SMALA_5890
SLAU: SLA_5900
SALF: SMD44_06633(rnd)
SALJ: SMD11_1535(rnd)
SLX: SLAV_09920(rnd)
SFK: KY5_6199c
KSK: KSE_55080(rnd)
TWH: TWT_394(rnd)
TWS: TW376
LXX: Lxx10490
CMI: CMM_1663
CMS: CMS1647
CMC: CMN_01643
MTS: MTES_3480
AMIN: AUMI_14930
AUW: AURUGA1_00900(rnd)
ART: Arth_1656
ARM: ART_0263
ARX: ARZXY2_2194(rnd)
AAU: AAur_1797
ACH: Achl_1649
KRH: KRH_14110(rnd)
BCV: Bcav_1962
JDE: Jden_1392
LMOI: VV02_16275
XCE: Xcel_1891
IDO: I598_0461(rnd)
CFL: Cfla_1726
CFI: Celf_2125
SERJ: SGUI_0523
BLIN: BLSMQ_2302
PAC: PPA1063
PAW: PAZ_c11070(rnd)
PACC: PAC1_05575
PACH: PAGK_1088
CACN: RN83_05680
CGRN: 4412665_01246(rnd)
PFR: PFREUD_12550(rnd)
PFRE: RM25_0937
ACIJ: JS278_01764(rnd)
MPH: MLP_23120(rnd)
NCA: Noca_3676
NDK: I601_0390(rnd)
KFL: Kfla_3731
TFU: Tfu_1901
NDA: Ndas_2832
NAL: B005_5377
TCU: Tcur_1761
SRO: Sros_6723
FAL: FRAAL2098
GOB: Gobs_1887
MMAR: MODMU_3911
KRA: Krad_1582
SEN: SACE_1832
AMD: AMED_2640(rnd)
AMN: RAM_13420
AMM: AMES_2612(rnd)
AMZ: B737_2613(rnd)
AOI: AORI_2627(rnd)
AMQ: AMETH_4748(rnd)
PDX: Psed_2891
PSEE: FRP1_15065
PSEH: XF36_15275
AMI: Amir_1548
SESP: BN6_18580
KAL: KALB_6812
ACTI: UA75_24240
ACAD: UA74_23735
AHG: AHOG_21620(rnd)
SAQ: Sare_1470
MIL: ML5_1882
ASE: ACPL_7089
ACTN: L083_6674
AFS: AFR_35190
ACTS: ACWT_6958
CAI: Caci_6780
SNA: Snas_2381
AHE: Arch_0798
TPYO: X956_06080
BLO: BL0948
BLJ: BLD_0690(rnd)
BLN: Blon_1712
BLON: BLIJ_1772
BLF: BLIF_0699
BLL: BLJ_0782
BLB: BBMN68_697(rnd)
BLM: BLLJ_0671
BLG: BIL_11770
BAD: BAD_0989
BADL: BADO_1041
BLA: BLA_0969
BBB: BIF_00713
BBC: BLC1_1036
BLV: BalV_1041
BLW: W7Y_1082
BLS: W91_1107
BANI: Bl12_1005
BANL: BLAC_05445
BANM: EN10_05475
BDE: BDP_1373
BDN: BBDE_1310
BBI: BBIF_1181
BBP: BBPR_1232
BBF: BBB_1168
BBRU: Bbr_0790
BBRE: B12L_0729
BBRV: B689b_0822
BBRJ: B7017_0764
BBRC: B7019_0773
BBRN: B2258_0761
BBRS: BS27_0799
BBRD: BBBR_0758
BAST: BAST_0675
BTP: D805_0771
BCOR: BCOR_0577
BKS: BBKW_1231
BPSP: AH67_05895
BANG: BBAG_0665
BCAT: BBCT_1096
BPSC: BBPC_1108
BSCA: BBSC_1651
SIJ: SCIP_0730
PDO: PSDT_0763
TBI: Tbis_2266
CWO: Cwoe_5400
AFO: Afer_1615
AYM: YM304_20250(rnd)
ELE: Elen_1734
EYY: EGYY_13090(Rnd)
AEQ: AEQU_0993
APV: Apar_0639
OLS: Olsu_0811
CAER: CSV91_01375(rnd)
CBAC: JI75_03635
SYN: sll0320(rnd)
SYZ: MYO_122120(rnd)
SYY: SYNGTS_2192(rnd)
SYT: SYNGTI_2191(rnd)
SYS: SYNPCCN_2190(rnd)
SYQ: SYNPCCP_2190(rnd)
SYJ: D082_05920(rnd)
SYW: SYNW2036(rnd)
SYC: syc0851_c(rnd)
SYG: sync_0471
SYR: SynRCC307_2079(rnd)
SYX: SynWH7803_0465(rnd)
SYP: SYNPCC7002_A2054(rnd)
CYA: CYA_1113
CYB: CYB_1361
SYNR: KR49_11110
SYND: KR52_00390
SYH: Syncc8109_0420(rnd)
SYNW: SynWH8103_02342(rnd)
TEL: tlr1083
THN: NK55_01745(rnd)
CYI: CBM981_1822(rnd)
LET: O77CONTIG1_04664(rnd)
HHG: XM38_033990(rnd)
PMA: Pro_1740(rnd)
PMM: PMM1584(rnd)
PMT: PMT_1703
PMB: A9601_17921(rnd)
PMC: P9515_17711(rnd)
PMF: P9303_22631(rnd)
PMG: P9301_17761(rnd)
PMH: P9215_18571(rnd)
PMJ: P9211_17051(rnd)
PME: NATL1_20321(rnd)
PRC: EW14_1942
PRM: EW15_2104
AMR: AM1_1676(rnd)
MAR: MAE_26030
CYL: AA637_13005(rnd) AA637_14365(rnd-2)
GEN: GM3709_63
CYT: cce_1016(rnd)
TER: Tery_1621
GLJ: GKIL_2520(rnd) GKIL_4485
NAZ: Aazo_2509
NSP: BMF81_00996(rnd) BMF81_01723(rnd_2)
CTHE: Chro_2541
CEO: ETSB_1031(rnd)
ATM: ANT_02860
CAP: CLDAP_10000(rnd)
OTE: Oter_0859
OBG: Verru16b_01068(rnd)
CAA: Caka_2322
AMU: Amuc_0573
AGL: PYTT_0637
XII: AMD24_00467(rnd)
MIN: Minf_0652(rnd)
RBA: RB5689(rnd)
PSL: Psta_3351
PIR: VN12_12070(rnd)
PLM: Plim_0672
PLS: VT03_18105(rnd)
PLH: VT85_05550(rnd)
FMR: Fuma_01920(rnd)
TTF: THTE_3074
GES: VT84_19240(rnd)
IPA: Isop_1946
SACI: Sinac_1196
PBOR: BSF38_05424(rnd)
PBU: L21SP3_01370(rnd)
PBP: STSP1_01942(rnd)
PBAS: SMSP2_02772(rnd)
LIL: LA_2917(rnd) LA_4091(rnd)
LIE: LIF_A2370(rnd) LIF_A3260(rnd)
LIC: LIC_11141 LIC_13263(rnD)
LIS: LIL_12490(rnd1) LIL_13360(rnd2)
LBJ: LBJ_0193(rnd) LBJ_2281
LBL: LBL_0826 LBL_2890(rnd)
LBF: LBF_0167(rnd) LBF_0748
ABAC: LuPra_04133(rnd)
FSC: FSU_0908
GAU: GAU_3018
GBA: J421_2109
HSW: Hsw_3137
NDE: NIDE2445(rnd)
NMV: NITMOv2_2096(rnd)
NIO: NITINOP_2318(rnd)
NJA: NSJP_3437(rnd)
 » show all
Taxonomy
Reference
1  [PMID:342522]
  Authors
Ghosh RK, Deutscher MP.
  Title
Identification of an Escherichia coli nuclease acting on structurally altered transfer RNA molecules.
  Journal
J Biol Chem 253:997-1000 (1978)
Reference
2  [PMID:6263885]
  Authors
Cudny H, Zaniewski R, Deutscher MP.
  Title
Escherichia coli RNase D. Purification and structural characterization of a putative processing nuclease.
  Journal
J Biol Chem 256:5627-32 (1981)
Reference
3  [PMID:6263886]
  Authors
Cudny H, Zaniewski R, Deutscher MP.
  Title
Escherichia coli RNase D. Catalytic properties and substrate specificity.
  Journal
J Biol Chem 256:5633-7 (1981)
  Sequence
[eco:b1804]
Reference
4  [PMID:2828310]
  Authors
Zhang JR, Deutscher MP.
  Title
Cloning, characterization, and effects of overexpression of the Escherichia coli rnd gene encoding RNase D.
  Journal
J Bacteriol 170:522-7 (1988)
DOI:10.1128/JB.170.2.522-527.1988
Other DBs
ExplorEnz - The Enzyme Database: 3.1.13.5
IUBMB Enzyme Nomenclature: 3.1.13.5
ExPASy - ENZYME nomenclature database: 3.1.13.5
BRENDA, the Enzyme Database: 3.1.13.5

DBGET integrated database retrieval system