KEGG   Escherichia coli O111 H- 11128 (EHEC): ECO111_3072
Entry
ECO111_3072       CDS       T01097                                 
Symbol
trmC
Name
(GenBank) fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
eoi  Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:eoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eoi03016]
    ECO111_3072 (trmC)
Enzymes [BR:eoi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     ECO111_3072 (trmC)
Transfer RNA biogenesis [BR:eoi03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    ECO111_3072 (trmC)
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_8
Other DBs
NCBI-ProteinID: BAI36897
Position
3018523..3020529
AA seq 668 aa
MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF
VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL
APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF
APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREML
CGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA
LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKS
QHKIAQMLSMDLPAELAVGVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ
QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVA
GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ
RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA
VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL
KGKAVKAG
NT seq 2007 nt   +upstreamnt  +downstreamnt
gtgaaacactactccatacaacctgccaacctcgaatttaatgctgagggtacacctgtt
tcccgagattttgacgatgtctatttttccaacgataacgggctggaagagacgcgttat
gtttttctgggaggcaaccaattagaggtacgctttcctgagcatccacatcctctgttt
gtggtagcagagagcggtttcggcaccggattaaacttcctgacgctatggcaggcattt
gatcagtttcgcgaagcgcatccgcaagcgcaattacaacgcttacatttcattagtttt
gagaaatttcccctcacccgtgcggatttagccttagcgcatcaacactggccggaactg
gctccgtgggcagaacaacttcaggcgcagtggccaatgcccttgcccggttgccatcgt
ttattgctcgatgaaggccgcgtgacgctggatttatggtttggcgatattaacgaactg
accagccaactggacgattcgctaaatcaaaaagtagatgcctggtttctggacggcttt
gcgccagcgaaaaacccggatatgtggacgcaaaatctgtttaacgccatggcaaggttg
gcgcgtccgggcggcacgctggcgacatttacgtctgccggttttgtccgccgcggtttg
caggacgccggattcacgatgcaaaaacgtaagggctttgggcgcaaacgggaaatgctt
tgcggggtgatggaacagacattaccgctcccctgctccgcgccgtggtttaaccgcacg
ggcagcagcaaacgggaagcggcgattatcggcggtggtattgccagcgcgttgttgtcg
ctggcgctattacggcgcggctggcaggtaacgctttattgcgcggatgaggcccccgca
ctgggtgcttccggcaatcgccagggggcgctgtatccgttattaagcaaacacgatgag
gcgctaaaccgctttttctctaatgcgtttacttttgctcgtcggttttacgaccaatta
cccgttaaatttgatcatgactggtgcggcgtcacgcagttaggctgggatgagaaaagc
cagcataaaatcgcacagatgttgtcaatggatttacccgcagaactggctgtaggcgtt
gaggcaaatgcggttgaacaaattacgggcgttgcgacaaattgcagcggcattacttat
ccgcaaggtggttggctgtgcccagcagaactgacccgtaatgtgctggaactggcgcaa
cagcagggtttgcagatttattatcaatatcagttacagaatttatcccgtaaggatgac
tgttggttgttgaattttgcaggagatcagcaagcaacacacagcgtagtggtactggcg
aacgggcatcaaatcagccgattcagccaaacgtcgactctcccggtgtattcggttgcc
gggcaggtcagccatattccgacaacgccggaactggcagagctgaagcaggtgctgtgc
tatgacggttatctcacgccacaaaatccggcgaatcaacatcattgtattggtgccagt
tatcatcgcggcagcgaagatacggcgtacagtgaggacgatcagcagcagaatcgccag
cggttgattgattgtttcccgcaggcacagtgggcaaaagaggttgatgtcagtgataaa
gaggcgcgctgcggtgtgcgttgtgccacccgcgatcatctgccaatggtaggcaatgtt
cccgattatgaggcaacactcgtggaatatgcgtcgttggcggagcagaaagatgaggcg
gtaagcgcgccggtttttgacgatctctttatgtttgcggctttaggttctcgcggtttg
tgttctgccccgctgtgtgccgagattctggcggcgcagatgagcgacgaaccgattccg
atggatgccagtacgctggcggcgttaaacccgaatcggttatgggtgcggaaattgttg
aagggtaaagcggttaaggcggggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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