KEGG   Escherichia coli O111 H- 11128 (EHEC): ECO111_3299
Entry
ECO111_3299       CDS       T01097                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase, sigma 24 factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
eoi  Escherichia coli O111:H- 11128 (EHEC)
Brite
KEGG Orthology (KO) [BR:eoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eoi03021]
    ECO111_3299 (rpoE)
Transcription machinery [BR:eoi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ECO111_3299 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_28
Other DBs
NCBI-ProteinID: BAI37111
Position
complement(3270019..3270594)
AA seq 191 aa
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN
LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIRR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacctactggtagtgcgctatcagcataaagtggcgagtctggtttcccgctat
gtgccgtcgggtgatgttcccgatgtggtacaagaagcttttattaaagcctatcgtgcg
ctggattcgttccggggagatagcgctttttatacatggctgtatcggattgctgtaaat
acagcgaaaaattacctggttgctcaggggcgtcgtccaccttccagtgatgtggatgcc
attgaagctgaaaacttcgaaagtggcggcgcgttgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttgcgcatggcaataaccttgcgggagctggatggcctgagctatgaagagatagcc
gctatcatggattgtccggtaggtacggtgcgttcacgtatcttccgagcgagggaagct
attgataacaaagttcaaccgcttatcaggcgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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