KEGG   Escherichia coli O111 H- 11128 (EHEC): ECO111_4639
Entry
ECO111_4639       CDS       T01097                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
eoi  Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi03420  Nucleotide excision repair
eoi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:eoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECO111_4639 (uvrD)
   03430 Mismatch repair
    ECO111_4639 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eoi03400]
    ECO111_4639 (uvrD)
Enzymes [BR:eoi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECO111_4639 (uvrD)
DNA repair and recombination proteins [BR:eoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ECO111_4639 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     ECO111_4639 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: BAI38389
Position
4676418..4678580
AA seq 720 aa
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTMHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccatactcgattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcagctgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcgcaccgtctgctgcgtgcg
caccatatggacgccaatctgccgcaggattttcagatcctcgacagcgaggaccagcta
cgcctgctcaaacgcctaatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaaggcctgcgtccacatcatattcaa
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtgg
cttaacaagccgcatatccttcagcactatcgcgaacggtttaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgttggcgatgacgatcagtcaatctacggctggcgtggagcgcag
gtggagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgcgaacgccctgattgaaaacaac
aacgggcgtttgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgatgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgcttgccgagtgcgccattctctaccgcagtaacgcccagtcg
cgtgtgctggaagaagcactgttgcaggcgagtatgccgtaccgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgtaacgacgacgcggcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggaactgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgtaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcgttcctatcccatgcggcgctg
gaagcaggcgaagggcaggcggatacctggcaagatgcggtacaactgatgaccatgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtcggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaactcgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttattggcgagctgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcagcggatgggt
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccattgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcatttcagggccagggtattaaatggctggtggcggcttatgcccggctggagtcggtg
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system