KEGG   Emticicia oligotrophica: Emtol_2491
Entry
Emtol_2491        CDS       T02272                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
eol  Emticicia oligotrophica
Pathway
eol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Emtol_2491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eol03019]
    Emtol_2491
   03016 Transfer RNA biogenesis [BR:eol03016]
    Emtol_2491
Enzymes [BR:eol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Emtol_2491
Messenger RNA biogenesis [BR:eol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Emtol_2491
Transfer RNA biogenesis [BR:eol03016]
 Prokaryotic type
  tRNA degradation factors
   Emtol_2491
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3
Other DBs
NCBI-ProteinID: AFK03627
Position
complement(2590036..2592414)
AA seq 792 aa
MTKNKQKSYYDQMKAEILAFFSVNSEHPYTLQDLFSHYDVKNKQEKALYGMLLEDLLEEG
KIYQIDKGKYTVDVNANSVVGRLDHVNPRFGFIRYDETKPDIWVSADDMKGAIDGDLVKA
TVYGEFYRKGDNPEGAIIEIIERGRKEIVGKIQTFGNYALVHPDHKNLHDDIFVPKDKIK
GATKDDLVIVRILTYPTNVQQGTGEVIEILGKSGENNAEMHAILAEFGLPIRFDKAIEEE
AAAISEVITEEEIKKRRDFRNILTFTIDPHDAKDFDDALSFRVLENHNFEIGVHIADVTH
YVREGTRLEEEAYNRATSVYLVDRTIPMLPEKLSNNLCSLRPNEDKLTFSAVFEMTHDGR
VISEWFGRTIIHSDKRFTYEEAQEVLENEEGDVLNPITEPNEILEKYRFPLHTLNHLAKI
LKKERFRNGAINFETNEVKFKLDETGKPLGVVLKIRKDAHKLIEEFMLLANKKVAEFVFK
LGGKKQGKQSEESQTQHSTTMVYRVHEPPNPEKLQNFANFAGRFGFSIRTDSDKSLSNSM
NKMMSEVEGTPVQNVLEQLAVRTMSKARYTTESLGHFGLAFDHYSHFTSPIRRYPDMMAH
RLLHHYLTASPKDFGNVSRDEFEKKSKHSSDREKLAAEAERASIKYKQVEFMSLQDRKTV
FSGVVTGVTDFGIFVEITTTNCEGMVRLADLKDDYYEWDRDNYRVVGKRTGRVINFGDTV
KVIVKGTDLDRRSMDLELVGLEGKTMPSSNTRRSNRGQRDAVSAKSGPRKRERTAPKRQK
SADKNKGKRRKK
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgacaaaaaacaaacaaaaatcatattatgaccaaatgaaggcagaaattctcgctttc
ttttcggtcaatagtgagcatccatatactttacaagaccttttttctcattatgatgta
aaaaacaagcaagaaaaagcactttacggaatgctcttagaggatttgctcgaagaagga
aaaatatatcaaatagataaaggtaaatatacggttgatgtcaatgccaactctgtggtt
ggccgccttgaccacgtgaatccacgctttggatttatcagatacgatgaaactaaacct
gatatttgggtaagtgccgacgacatgaaaggtgccattgacggagacttagtgaaagca
accgtttacggtgaattttatagaaaaggtgataaccccgaaggtgctatcattgaaatt
atcgaacgtggacgaaaagaaattgtaggtaagattcagacttttggtaattatgcactc
gtgcaccccgaccacaaaaacctacacgatgatattttcgtaccgaaagataaaattaag
ggtgctaccaaagacgatttagttattgtacgaattttgacttatccgaccaatgtacaa
caaggaacgggtgaggttattgaaattctaggaaaatcgggtgaaaataacgcagaaatg
cacgcaattcttgccgaatttggtttgccaatcagatttgataaggcaatcgaagaagaa
gctgctgctatttctgaagttatcaccgaagaggaaatcaagaaaagaagagattttaga
aatatcctaacttttacgattgacccccatgatgcaaaagattttgatgatgctctcagc
tttagggttttagaaaatcataattttgaaataggcgtacacattgccgatgtaacgcat
tacgttcgtgagggaacccgactggaagaagaagcatataatcgtgctacctccgtttat
ttagttgaccgtacgattccgatgcttcctgagaagctttcgaataacctttgttcgctt
cgtcccaatgaagataaacttaccttttcggcagtatttgaaatgacacacgatgggcga
gtaataagtgagtggtttggccgtacgattatccattctgataaaagatttacttatgag
gaagctcaagaggttttagaaaatgaggaaggtgatgtattgaatccgattacggaaccc
aacgaaattcttgaaaaatatcgttttccgctgcatacgctgaatcatttagcgaaaatt
ttaaagaaagaacgcttccgtaatggagctattaacttcgaaactaatgaagtaaagttt
aaacttgatgaaacaggaaaaccacttggtgtagttctaaaaattaggaaagacgcccat
aaactgattgaagagtttatgcttttggccaataaaaaggtggcagagtttgtatttaaa
cttggcggcaaaaaacaaggtaaacagagtgaagaaagccaaactcagcactcaacaacc
atggtttatcgtgtacacgaaccaccaaaccccgaaaaactacaaaactttgccaatttt
gcgggtcgctttggcttctcaattcgcacagattctgataaatcattatcgaattcaatg
aacaaaatgatgtcggaggtagaaggcactccagttcagaatgttttggaacaattggct
gttcgcacaatgtcgaaagctcgctatacaacggagtctttggggcactttggtttagca
tttgaccattacagtcattttacatcgccaattcgccgttatccagatatgatggctcac
cgactcttacaccattatctgacagcctcaccaaaagattttggaaacgtttcaagagat
gaatttgagaaaaagtcgaagcactcatctgatcgtgaaaaacttgccgccgaagctgaa
agagcttctatcaaatataagcaagtggaattcatgagcctacaagaccgcaaaacggtc
tttagcggtgttgtgacaggtgtaactgattttggcattttcgttgaaataaccactaca
aattgcgaaggtatggttcgcttagccgacttaaaagatgattactatgaatgggacaga
gataattatcgagtagtaggcaaacgcactggtcgagtaattaattttggtgataccgta
aaagttatcgtcaaaggtactgacttagatagaagaagcatggatttagaattggtaggt
ttagaagggaaaaccatgccatcgagtaacactcgccgtagtaatagagggcagagagat
gcagtaagtgcgaaatctggcccaagaaaaagagaacgaacagcccctaaacgccaaaaa
tcggccgataaaaataagggcaagcgacgaaaaaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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