KEGG   Erwinia pyrifoliae DSM 12163: EPYR_02246
Entry
EPYR_02246        CDS       T02121                                 
Symbol
ymfC
Name
(GenBank) ribosomal large subunit pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
epr  Erwinia pyrifoliae DSM 12163
Brite
KEGG Orthology (KO) [BR:epr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:epr03009]
    EPYR_02246 (ymfC)
Enzymes [BR:epr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     EPYR_02246 (ymfC)
Ribosome biogenesis [BR:epr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EPYR_02246 (ymfC)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CAY74626
Position
2327898..2328554
AA seq 218 aa
MRLLFLSAKTMRKTSFTHHHTKRNRPRSAAKPAGKSPRCVVLFNKPFDVLPQFSDGSGRR
TLKDYVPQLGIYAAGRLDRDSEGLMVLTNDGELQAQLTQPGKRTGKVYYVQVEGCPQEGD
LQPLRDGVNLKDGPTLPAVVEKVAAPDWLWDRQPPIRERKAIPTCWLKITLYEGRNRQVR
RMTAHIGFPTLRLIRFSMGSLGLRALAPGEWRDISDEI
NT seq 657 nt   +upstreamnt  +downstreamnt
atgcgcttattgttcctgagtgcaaagactatgcgaaaaacttcctttactcatcatcac
actaagcgcaaccgtccccgctctgccgcaaagccagcaggcaaaagcccccgctgcgtg
gtgctgtttaacaaaccgttcgatgtgttaccacaatttagcgatggatccggtcgtcgc
accctaaaagattacgttccgcagttgggtatttacgccgcaggcaggcttgaccgcgat
agtgaagggctgatggtgttaaccaatgacggcgagctacaagcgcagcttacccagccg
ggtaagcgtaccgggaaagtctattatgtgcaggttgaaggctgcccgcaggaaggcgat
ctgcagccgctgcgcgatggggtaaatctgaaagatggccctaccctgccagcagtggta
gaaaaggtggctgcccccgactggttgtgggatcgtcagccacccatccgcgaacgcaaa
gccattccaacctgctggctgaaaataaccctttatgaaggacgtaaccgccaggtcagg
cgtatgaccgctcatatcggttttccaactttgcgcctgatccgtttttctatgggtagt
ttagggctacgggcgctggcacctggagagtggcgtgatatcagtgatgaaatctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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