KEGG   Erwinia pyrifoliae DSM 12163: EPYR_03100
Entry
EPYR_03100        CDS       T02121                                 
Symbol
recB
Name
(GenBank) DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
epr  Erwinia pyrifoliae DSM 12163
Pathway
epr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:epr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EPYR_03100 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:epr03400]
    EPYR_03100 (recB)
Enzymes [BR:epr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     EPYR_03100 (recB)
DNA repair and recombination proteins [BR:epr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EPYR_03100 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25
Other DBs
NCBI-ProteinID: CAY75480
Position
complement(3148041..3151577)
AA seq 1178 aa
MSQRAAETLEPLSLPLHGERLIEASAGTGKTFTIGLLYLRLLLGLGGAAAFSRPLSVEEI
LVVTFTEAATAELRGRIRANIHELRIACIRGKSPNLMLAALIAEIADLPQAASVLLAAEH
QMDEAGIFTIHGFCQRMLNLNAFESGMLFDQQLLEDETPLRRRAAADFWRRYCYPLPLPV
ARVVRQLWAGPEQLLKTLSPWLGGEAPVLKSAPESDETLEQRHEKIIARISMLKQAWLAA
GNLQQVIDASGVDRRSYNSKHLPNWLEKISLWAQAETQDYQLPKDLERFGQRILLEKTKK
GEPPRHPLFDQIDAFLAEPLSLRDLVIARALQQVRFVTQQEKRLHGQLGFDDLLGRFDFA
LQQPGGEALASAIRQRYPVALIDEFQDTDPQQYRIFRTLYRRQADSALLLIGDPKQAIYA
FRGADIFTYMKARSEVSAHYTLETNWRSSPAMVNAVNQLFLRQKNPFLFNEIPFINVNPA
APNHGLNFSVQGKVQPALQFWLQPGNGVGVSDYQQFMARQCAAEICRWLTAGQQGEALIG
NTGKQSPVQASDITVLVRSRSEAAVVREALYALAIPSVYLSNRDSVFTTPEAREMLWLLQ
AVLAPEQERVLRSALATSLFGTDALALDALSQDERAWDALVDEFVDYRQRWLQRGVLPML
RELMMKRQIAENLLASDNGERRLTDLLHVGELLQEASATLDSEHALVRWLAQQVEQPDGQ
SSVQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFVANFREADNGVYHDRQTFTALLDLQ
QSEESIELAEQERLAEDLRLLYVALTRSVFHCSVGIAPLIKGARKKEGNSDLHCSALGYL
VQQGEPADASGLLAALQALNGDAIALMRPAEADATPWQAQQTEPQILSSRTLPRSLRDNW
RVTSYSGLQQHGHSIALELLPRLDVDAAGEASNEPVPQLTPHTFPRGAGPGTFLHGLFET
LEFTTPLDEEWLAQQLSSQGLGDEWQPVMRDWVERILHTPLNETGVSLYQLPAQARKAEL
QFYLPISRLLTAEALDRVVRQDPLSQPCPPLDFHQVQGMLKGFIDLVFCWQGKYYLLDYK
SNWLGEDSSAYTREAMAQAMQAHRYDLQYQLYTLALHRYLRHRLVVYDYQQHFGGVIYLF
LRGLDGAAGSNGIYFTRPQPEFVTALDQLFASPPESNL
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgagccaacgagccgctgaaacgctggagccgctgagccttcccctgcacggcgagcgg
ctgattgaagcttcggccgggacgggaaaaaccttcaccatcgggctgctctatctgcgg
ctgctgctcggcctgggaggggcggcggccttcagccgcccgctgtcggtagaagaaatt
ctggtcgttaccttcaccgaggctgccaccgccgagctgcgcgggcgtattcgtgccaat
atccacgagctgcgcatcgcctgcattcgtggtaaaagcccgaatctgatgctggcggca
ttaatagcggagatcgccgatctgccccaggcggcatcggtgctgctggcggccgagcat
caaatggacgaagccggcatttttaccattcacggcttttgccagcgcatgctgaatctc
aatgcctttgagtccggtatgctgtttgatcagcagctgctggaagatgaaacgccgctg
cgccgccgggcggcggccgatttctggcgtcgctactgttatccgctgccgctgccggta
gcacgcgtggtgcgccaactgtgggcggggccggagcagttactgaaaaccctgtcgccg
tggcttggcggcgaagcgccagtgctgaaatcggcgccggagagcgatgagacccttgag
cagcgccatgagaaaatcattgcgcgcatcagcatgttgaaacaggcgtggctggcggcg
ggtaatttacagcaggtgattgacgcttccggcgttgatcgccgcagctacaatagtaag
cacttaccaaactggctggagaaaatctccctgtgggcgcaggcagagacgcaagactac
cagctgccaaaagaccttgagcgcttcggccagcgcatcctgctggagaaaacgaaaaaa
ggtgagccgccacgtcaccccctgttcgatcaaattgacgcctttctcgccgagccgctg
tcgctccgtgacctggtgattgcccgcgcgctgcagcaggttcgctttgtcacccagcag
gagaaacgactgcatggccaactgggatttgacgatttgttgggacgcttcgattttgcc
ctccagcagccgggtggtgaggcgctggcttcagctatccgccaacgttatccggtggcg
ctgatcgatgaattccaggacaccgacccgcagcagtatcgtattttccgcacgctgtat
cgtcggcaggctgacagtgcactgctactgatcggcgacccgaaacaggcgatctacgcg
tttcgcggcgcggatatctttacctatatgaaagcgcgctctgaagttagcgcccactat
acgctggagactaactggcggtcgtctccggcaatggttaatgcggtcaatcagctgttt
ttacgccagaaaaacccgttcctcttcaacgaaataccctttattaacgtcaatccggct
gcgcctaatcacggcctgaactttagcgtgcagggtaaagtgcagcctgctctgcagttc
tggctacagcccggtaatggagtgggggttagtgattaccaacagtttatggcgcgtcag
tgcgcggcggaaatctgccgctggctcactgcgggtcagcagggcgaggcgttaatagga
aataccgggaaacagagtccggtacaggcctcggacattaccgtgctggtgcgcagccgc
agtgaagccgcagtggtgcgcgaagcgttatatgctctggccattccgtcagtttacctc
tccaaccgtgacagcgtatttaccacgccggaagcgcgcgaaatgctgtggctgttacag
gcggtgctggctccggagcaggagcgcgttctgcgcagcgcgctggccaccagcctgttt
ggcaccgatgcgctggcgcttgatgcgctcagccaggacgaacgcgcatgggatgcgctg
gtggatgagttcgttgattatcgccagcgctggctgcaacgcggcgtgctgccgatgctg
cgtgagctgatgatgaaacgccagatagccgaaaacctgctggcctccgataacggtgaa
cgccggctgaccgatctgctgcatgtgggcgaactgttgcaggaagcctctgccaccctc
gacagcgaacatgcgctggtgcgctggctggcgcagcaggtggagcagccggatggccag
tcatccgttcagcagctgcgtctggagagcgatcgccatttggtacagattgtcactatc
cacaaatccaaaggtttgcagtatccgctggtgtggctgccgtttgtcgccaactttcgc
gaggcggataacggcgtttaccatgaccggcagacgtttaccgcgttgcttgatttacag
cagagcgaggaaagtatcgaactggcggagcaggagcggctggcggaagatctgcgattg
ctctacgtcgcactgactcgttcggtatttcactgtagcgttggcatcgcgccgctgatt
aagggcgcacgtaagaaagagggcaacagcgacctgcattgcagcgcgctgggctatctg
gtgcagcagggtgaaccggccgatgcctccggcctgctggcggcattacaggcgttgaac
ggtgatgccatagcgttaatgaggccagcagaggcagatgccaccccgtggcaggcgcag
caaacggagccgcaaatcctcagcagccggacgctgccacgctcgctgcgtgataactgg
cgcgtgaccagttattccggtctgcaacagcacggccattcaattgcgctggaattgctg
ccgcgcctcgacgttgatgcggccggggaagccagcaatgaacccgttccgcagctgacg
ccgcataccttcccgcgcggtgccgggccgggaacatttcttcacgggctgtttgaaacg
ctggaattcaccactccgctggatgaagagtggctggcgcagcaactcagcagccagggg
ctgggggatgagtggcagccggtgatgcgcgactgggttgagcgcatcctgcataccccg
cttaatgagacgggcgtcagcctttaccagctgccagcacaagcaaggaaggcggagctg
cagttttatttgccgatctcccgtctgctgacggcagaggcgctggacagggtggtacgt
caggacccgctgtcgcagccctgcccaccgctcgactttcaccaggttcagggcatgttg
aaaggttttatcgatctggtgttctgctggcagggtaaatattacctgctggactataaa
tctaactggctgggcgaagacagcagcgcctatacgcgggaggcgatggcgcaggcgatg
caggcgcatcgttatgatttgcagtaccagctttacacgttggcgctgcaccgctatctg
cgtcaccgtctggttgtttacgactaccagcagcactttggtggcgttatctatctgttt
ctgcgtggtctggacggtgcggctggcagtaacgggatttactttacccgaccgcagccg
gagtttgtcaccgctcttgaccaactgtttgccagccccccggagagtaacctatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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