KEGG T01000: EpC

Erwinia pyrifoliae Ep1/96: EpC_12250

Entry

EpC_12250         CDS       T01000

Symbol

truA

Name

(GenBank) tRNA pseudouridylate synthase I

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

epy Erwinia pyrifoliae Ep1/96

Brite

KEGG Orthology (KO) [BR:epy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:epy03016]
    EpC_12250 (truA)
Enzymes [BR:epy01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     EpC_12250 (truA)
Transfer RNA biogenesis [BR:epy03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    EpC_12250 (truA)
Prokaryotic type
    EpC_12250 (truA)

SSDB

Motif

Pfam:

PseudoU_synth_1 DUF2344 WVELL

Other DBs

NCBI-ProteinID:

CAX55004

Position

1412989..1413804

AA seq 271 aa
MSDIDVLQPTHKLALGIEYDGSRYYGWQRQNEVRSVQEKLEKALAKVADRPIAVFCAGRT
DAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPADIAVRWVKAVADDFHARFSATARRYR
YVIYNQRLRPAILAGGVTHFYHPLDVEKMQRAGQCLLGENDFTSFRAVQCQSRTPMRNVM
HLKVSRHGAYVVVDIKANAFVHHMVRNIVGSLMEIGCGNQPEGWMRELLVAKDRKLAAAT
ARAEGLYLVAVDYPACYELPRPPMGPLFLGD

NT seq 816 nt +upstreamnt +downstreamnt
atgtccgacatcgatgtgctgcagccaactcataaactggcgctaggcattgaatatgac
ggcagccgttactatggctggcagcggcagaatgaagtgcgtagcgtgcaggaaaaactg
gaaaaagcgttggcgaaggtcgccgatcgtccgatcgctgttttctgcgctggacgcacg
gatgccggagttcatggcaccggccaggtggtgcattttgagacgactgcgcagcgtaaa
gatgcggcctggacgctgggggtgaatgccaacctgccagcagacatcgccgttcgctgg
gtcaaagcggtagcggatgacttccatgcccgcttcagcgccaccgcccggcgctatcgc
tacgttatttacaaccagcgactgcgcccggctattctcgccggcggcgtcacgcatttt
taccacccgctggacgtggaaaaaatgcagcgcgccgggcagtgcctgctgggagaaaat
gattttacgtcatttcgcgccgtgcagtgccagtcgcgtacgccgatgcgcaacgtaatg
catctgaaggtcagtcgccacggtgcctatgtggtggtggatattaaggccaacgcgttt
gttcatcatatggtgcgcaatatcgtcggtagcctgatggaaattggctgcggtaatcag
ccagagggctggatgcgtgagctgctggtggcgaaggatcgcaagttggcagcagcaaca
gcgcgtgcggaagggctgtacctggttgcggtggactatcctgcctgctatgagttaccc
cgcccaccgatgggaccgctgttcctcggtgactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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