KEGG   Erwinia pyrifoliae Ep1/96: EpC_29870
Entry
EpC_29870         CDS       T01000                                 
Name
(GenBank) RNA polymerase ECF-type sigma-24 factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
epy  Erwinia pyrifoliae Ep1/96
Brite
KEGG Orthology (KO) [BR:epy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epy03021]
    EpC_29870
Transcription machinery [BR:epy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EpC_29870
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16
Other DBs
NCBI-ProteinID: CAX56766
Position
3284149..3284715
AA seq 188 aa
MAEAENQIQAWPTLMARAQAGDRKAYNRLLKAMVPAIRAFVRKKIRNEALVEDVVQETLL
AIHRVRHTYDPQRPILPWVAAISSARAIDALRQSGRRQEVQDDDALLNQPAYPDGCEFAE
SEESEALSGCLDSLPLRQRQMVEMVHLRQQSLVQAAAQSNLSVSAVKSLLYRAMLNLRKY
GKGNHEKS
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcagaggctgaaaaccagatacaggcgtggcccacgctgatggcccgcgcacaggcg
ggcgacagaaaagcctacaaccgcctgctgaaagcgatggttcccgccattcgggccttc
gtgcgtaaaaaaattcgcaatgaggcgctggttgaagacgtggttcaggagacattgctg
gcgatccaccgcgtgcgccatacctacgatccgcagcgccccattctgccatgggtggcg
gccatctcttcggcgcgggcgattgacgcactgcgccagtctggtcgccgtcaggaggtg
caggacgatgatgcgctgcttaaccagcctgcttatccagacggttgtgagtttgcggag
agcgaagaaagtgaagcgttaagtgggtgtctcgatagccttccgctgcgtcagcgccag
atggtggaaatggtgcatctgcgccaacaaagcctggtgcaggctgcggcacaaagtaat
ctgtccgtttctgcagttaaatcgttattgtatcgcgcaatgctcaatcttcgtaagtac
ggcaagggtaaccatgagaaatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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