KEGG   Equus przewalskii (Przewalski's horse): 103544024
Entry
103544024         CDS       T04644                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
epz  Equus przewalskii (Przewalski's horse)
Pathway
epz04820  Cytoskeleton in muscle cells
epz05169  Epstein-Barr virus infection
epz05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:epz00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103544024 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    103544024 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103544024 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epz03019]
    103544024 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:epz04812]
    103544024 (VIM)
   04147 Exosome [BR:epz04147]
    103544024 (VIM)
Messenger RNA biogenesis [BR:epz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103544024 (VIM)
Cytoskeleton proteins [BR:epz04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     103544024 (VIM)
Exosome [BR:epz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103544024 (VIM)
  Exosomal proteins of other cancer cells
   103544024 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri TPR_MLP1_2 DUF573 RBD-FIP Laminin_II Sec10_N DUF4515 GAS
Other DBs
NCBI-GeneID: 103544024
NCBI-ProteinID: XP_008509099
Position
Un
AA seq 466 aa
MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSSSRTLYSSSPSGV
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMVQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcgagtcggccgagctccagccggagctacgtgaccacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagctccagccgcaccctctactcctcgtccccgagcggcgtg
tacgccacgcgctcctcggccgtgcgcctgcggagcagtgtgcccggcgtgcggctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgtgtcgaggtggagcgcgacaacctggcggag
gacatcatgcggctccgggagaagttgcaggaggagatggttcagagagaggaagccgag
agcaccctgcaatccttcagacaggatgttgacaatgcttctttggcacgtcttgacctt
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaattgatgtggatgtt
tccaagcctgacctcacggctgccctgcgggacgttcgtcagcagtatgaaagcgtggct
gccaagaaccttcaggaggccgaggaatggtacaagtccaagtttgccgacctctctgag
gctgctaaccggaacaatgatgccctgcgtcaggcgaagcaggagtcaaatgagtaccgg
agacaggtgcagtccctcacctgcgaagtggatgcccttaaaggaactaatgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgctgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagaaatggcgcgtcacctt
cgggaataccaagacctgctcaatgttaagatggctcttgacattgagattgccacctat
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggaatcactccctctggttgacactcactcgaaaagg
acccttctgattaagacggttgaaactagagatggacaggttatcaacgaaacttctcag
catcatgatgatcttgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

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