KEGG   Agathobacter rectalis M104/1: ERE_05570
Entry
ERE_05570         CDS       T02588                                 
Name
(GenBank) recombination helicase AddA, Firmicutes type
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
era  Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:era00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:era03400]
    ERE_05570
Enzymes [BR:era01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ERE_05570
DNA repair and recombination proteins [BR:era03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     ERE_05570
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_12 DEAD ResIII
Other DBs
NCBI-ProteinID: CBK92644
Position
519088..522750
AA seq 1220 aa
MDVKWTSEQKKVIDLRDRDILVSAAAGSGKTAVLVERIVNRICVDNPPVDIDRMLVVTFT
KAAAAEMRERVSRAIDSLKEQKPDDENLQRQSTLVHNALITTIDSFCLFVVQNNFAQLNL
DPDFRIGDQAELKLMLKDALAQVFEDNYAREDNEEFINLIDTYSKGRNDSAVRQMVEDIY
YKAGSSSWPRKWMNSLLRLYDIKSAKQLEDSEIIKEIVDYSRVLLEEAVQELTMAKDLAS
ATPGLEKYALTLSEDIALFDGMADVTGYVGMQEFLNKISFGRIAVIRKFDGDEKKKERVK
SMRDATKKKVDGIKQKYFGMSIELMYEQLERQRPFVKELIRLSLEFYDAMEAVKTRKRVF
DFSDIEHFALRILVDEQTLEPTETAREFSKHFEEIMIDEYQDSNQVQEDILTAISREHQG
VGNMFMVGDVKQSIYRFRMARPELFMEKYNTYTSDDSAHQRIDLHKNFRSRNEVLDFTND
IFYKIMAADLGNVQYDDDAALYPGASYPKETMRPELLLVDYKDEDLSEIIEDEDGDKVQI
EALLIANRIRSLMENGMVTDKKTGQLRAVQYRDIVILSRSVATWGNTVAAVLKDCDIPAH
VESNTGYFSSYEIQVILSMLRILDNPLQDIPMAAVLASPIVGMDDEELAQIRSAFKGVSF
AQAALSAMAGENGYEDEKLKAFALVFERLRGAVADTPIHELLYMMLDETGFYRYASAMPA
GKRRRQNIDMLIEMAAAYEKTSYKGLFHFVRYIDIQQKYEIDYGEADTAGENDDVVRIMT
IHKSKGLEFPVVFVSGLGKGFNTQDTKSDLVIHEKLGLGLVEKTKSPRTKRPSLIRNEIE
SRIKRENLGEELRVLYVALTRAKEKIILTGGLSNAQKSFEKYRGNVNANQPISFGQREGA
GCYLDWVIPAMLSYPDKYTVSTVDATEFAARTAMDMAANDISKAQLIGHISAADETKAKE
LAEEFDFEYAYASDITKKSKYSVSELKHDSMVEKYDSTEREAERPKFLLEEKETYVPDFA
RDDEAGGASNESKELKNAVGVNQGALRGTAVHRAMECLDFKSLCDIDTKDHVAVSAFVKK
SMDEMLKKGLITDDMYRLTRPKLIEQFISSDVAARMAQADKRGDLYKEKPFVMDYEGVLV
QGIIDVFWLENDKIVLLDYKTDRVNAAKELIDRYSTQLKLYADALGRIFSTDGKSIQADE
RLIYSFRLQQTIVICREYKK
NT seq 3663 nt   +upstreamnt  +downstreamnt
atggatgttaaatggaccagtgaacagaaaaaggtaatagatttaagagacagggatata
cttgtatcggcggcagcgggctcaggaaagacagctgtactcgttgagcgtatagtaaac
agaatatgtgtggataatccgccggtggatatcgacaggatgcttgtggtgacgtttacc
aaggctgcagctgctgagatgagggagcgtgtcagccgtgcgatagacagcttgaaggag
caaaagccggacgatgagaacctgcagaggcagtcgacactggttcacaatgcgctcatc
actacaatcgattcgttttgtctgtttgtggtgcagaataatttcgcacagcttaatctg
gatcctgatttcagaatcggtgaccaggcagagcttaagcttatgctaaaggatgctttg
gcacaggtatttgaggacaattatgcaagagaagacaacgaggaatttatcaaccttata
gatacctacagcaaggggagaaatgactctgccgtcaggcagatggtggaggatatctac
tataaggcgggcagctcatcatggccgagaaagtggatgaacagcctcttaaggctctat
gatataaagtcagctaaacagcttgaggactcagagatcattaaggagatagtggattac
agcagggtgcttttggaggaggctgttcaggagcttacaatggcgaaagacctggcatca
gctacacccgggcttgaaaagtatgcgcttacactttcagaggatatagcattgtttgat
ggaatggctgatgtgacaggctatgtcggcatgcaggagttcttaaacaaaatatccttt
ggcagaattgctgtcatcaggaaatttgacggagacgagaagaaaaaggaacgcgtgaaa
agtatgcgcgatgccaccaagaagaaggtagacggaataaagcagaaatactttggcatg
tcaattgagcttatgtatgaacagctggagcgtcaaaggccatttgttaaagagctgata
aggctctcactcgagttttatgatgcgatggaggctgtaaagacaagaaaaagagtattt
gatttttctgatatagagcactttgcgcttcgcatactggtggatgaacagacactggag
cccacagagacagcgcgtgagttttcaaaacattttgaggaaatcatgattgacgagtat
caggactcaaaccaggtgcaggaggatatacttaccgctatttcaagagagcaccaggga
gtcggcaacatgtttatggtgggcgatgtaaagcagagcatatacaggtttcgaatggcg
cgccctgagctgtttatggaaaaatacaacacatatacatcagatgacagtgcacaccag
agaatagacctgcataaaaatttcagaagcaggaatgaggtgttagactttactaacgac
atattctacaaaatcatggcagcagatttgggcaatgtgcagtatgatgacgatgcggca
ctgtatcccggtgcaagctatccaaaggagacgatgcgtcctgagcttttgcttgttgac
tacaaggatgaggatctgtctgaaattatagaggatgaggatggagataaggtgcagata
gaggcgcttttgattgcaaaccgtatcaggagtctgatggaaaacggcatggtgactgat
aaaaagacagggcagctaagagccgtgcagtacagggatatagtgatactttcgagaagt
gttgcaacctggggcaatacagtggcagcagtattaaaggactgtgatattccggcgcat
gtagagtcgaatacaggctacttttcatcgtatgagatacaggtgattctgtccatgctt
cgcatactcgataatccgctgcaggatattccgatggcagcagtgcttgcttcgcctatc
gtgggcatggatgatgaggagctggcacagattaggtctgcctttaagggcgtaagcttt
gcacaggctgcacttagcgccatggcaggtgagaatggctatgaggacgagaagcttaaa
gccttcgctttggtatttgagagactaagaggtgctgtagctgatacgccaatccatgag
cttttgtacatgatgcttgatgagacaggcttttacaggtatgcatcggccatgccggca
ggaaaacggcgcagacagaatatagatatgctgattgagatggccgcagcctatgaaaag
accagctacaaggggctgtttcactttgtcaggtacatagatatacagcagaaatacgag
atagactacggagaggccgataccgcaggcgagaatgacgatgtggtgcgcattatgaca
atccataagagcaagggtcttgagtttcctgtagtgtttgtttccgggcttggcaagggc
tttaacacgcaggacacaaaatcagacctggtgatacatgaaaagcttgggcttggcctt
gtggaaaaaacaaaaagcccaaggacaaagcgaccatcactaatcagaaatgagatagag
agtcgcattaaaagggaaaatctgggagaagagctgcgtgtgctgtatgtagcgctcacc
agggcgaaggaaaagattatcctgacagggggactttcaaatgcccaaaaatcctttgag
aagtatagaggcaatgtaaatgcgaaccagccaataagctttggacaaagggagggagca
gggtgttacctggactgggttatacctgccatgctgtcgtacccggataagtatacggtc
tccacagtcgatgcaacagagttcgctgcacgaactgcgatggatatggcggcaaacgat
atatcaaaagcgcagcttattgggcacataagtgcagcggatgaaacaaaagccaaagag
ctcgcagaggaatttgattttgagtatgcatatgcttctgatataactaaaaaaagcaaa
tattcggtatctgagctgaagcatgactctatggttgaaaagtacgacagcacagagagg
gaggcagagcgtcctaagttcctattggaggagaaggagacgtatgtgccggactttgcg
agggatgatgaggcaggcggtgcttctaatgaaagcaaagagcttaaaaatgcagtaggt
gtgaatcagggagcgctgcgcggaactgcagtgcaccgtgccatggagtgtctggatttc
aagagcctgtgtgatatagatacaaaagaccatgtggcagtcagtgcatttgtgaagaaa
agcatggatgaaatgctaaaaaaggggcttatcacagatgacatgtacaggctgaccaga
ccaaagcttatagagcagtttatatcatcagatgtggcagcgcgtatggcacaggcggat
aagagaggcgatttgtataaagagaagccttttgtgatggactatgagggtgtgttggtt
cagggaattattgatgtattctggctggagaatgataaaatagtgctgcttgattataag
acagacagggtaaatgctgctaaagagcttatcgacagatacagcacacagctaaaactg
tatgctgatgcacttggaaggattttttctacagatgggaaaagcatacaggcggatgag
aggctcatatattcattccgtttacagcagacaattgttatctgtcgtgaatataaaaaa
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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