KEGG   Agathobacter rectalis M104/1: ERE_12020
Entry
ERE_12020         CDS       T02588                                 
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
era  Agathobacter rectalis M104/1
Pathway
era03030  DNA replication
era03430  Mismatch repair
era03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:era00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ERE_12020
   03430 Mismatch repair
    ERE_12020
   03440 Homologous recombination
    ERE_12020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:era03032]
    ERE_12020
   03400 DNA repair and recombination proteins [BR:era03400]
    ERE_12020
Enzymes [BR:era01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ERE_12020
DNA replication proteins [BR:era03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ERE_12020
DNA repair and recombination proteins [BR:era03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ERE_12020
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2 GTP-bdg_N
Other DBs
NCBI-ProteinID: CBK93212
Position
complement(1248107..1248889)
AA seq 260 aa
MTIVLKAGKVYRLRKMSNIDNIKNYTVIDLEMTGLSAKNDKIIEIGAARVRGGEIVDTIS
TLVNPKQHIPQRVQELTGITDSDVENAADMDVAVDNLLDFIGDDIILGQNVTFDYSFLKQ
WAVNHKRTLSLNAYDTLKIARKCLPAEQSKKLEDLCEYFDVSRENAHRALDDAIETKQIF
EKLLALMDEKGEPVESKPLVYKAKKQTPATAHQVRQLRELMAEYGIADVISWDNLTRSQA
SRLYDEYRSRYINRCEDGSK
NT seq 783 nt   +upstreamnt  +downstreamnt
atgactatagtgttaaaagccggaaaggtttacagactaagaaaaatgagcaacatagat
aatataaaaaattacacggtgattgacctggaaatgacaggtctttcagctaaaaatgac
aagataatagagataggtgcggcacgtgtgaggggcggcgagatagtggatacgatatcc
acactggtaaatccgaagcagcatattccacagcgtgtgcaggaattaacgggaattacc
gacagtgatgtggaaaacgcggcagatatggacgtggctgtggataacctgcttgatttt
atcggagatgatatcatactcgggcagaatgtgacctttgattacagctttttaaagcag
tgggcggtaaatcacaagcgaaccctttcgctgaatgcatatgatactctgaaaatagcc
agaaaatgtctgcctgctgagcagtcaaagaagctggaggatttgtgtgagtattttgat
gtgagcagggaaaatgcccacagggcgctcgatgatgcgatagagacaaagcagatattt
gaaaagctgcttgcactgatggatgaaaagggagagccggtggagtcaaagccacttgta
tacaaggcaaaaaaacagacacccgccacggcccatcaggtcagacagctaagggagctg
atggctgagtatgggatagcagatgtcatatcgtgggacaacctgaccagaagccaggcc
tcaaggctgtacgatgaatatcgtagcagatatattaataggtgtgaggatggctcgaaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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