KEGG   Eremothecium cymbalariae: Ecym_4436
Entry
Ecym_4436         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K14308  nuclear pore complex protein Nup54
Organism
erc  Eremothecium cymbalariae
Pathway
erc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Ecym_4436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_4436
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Ecym_4436
SSDB
Motif
Pfam: Nup54 Nucleoporin_FG EOS1 RR_TM4-6
Other DBs
NCBI-GeneID: 11471591
NCBI-ProteinID: XP_003646299
UniProt: G8JTX9
Position
4:899222..901012
AA seq 596 aa
MFNFGGNTAATSGSATSGAGLFGAKPAAGGFSFGSNSNASQNTGGGLFSNPSNTTGVQGN
TGGGLFGSMQNTQTGTNGVSLFGSGSTTQTGTGGGLFGQSNNNQNNSAIGGVPAAQGQQG
NMVGGAVGAGIGVGGGGGGGGALFGQSSNPSQNPPSLTGLFNSHPNSGTSTLNQNSAVGG
MNNGLFGSNIGSNNNNSNSGTLFGQNNAPSNTGTGLFGQNTISAQTGGGMFGQNNASMQQ
PQQQSSGLFGSTALSNTQPSFAWSQQQPSNQSVNNNQQQQQQQQQQQQQEQQQQQQQQQQ
QQQQQQQQQQQQLQFQTQMQMQMLHSNYPQQIQEQILKCRDSWDPSSQRSKLRTFVYNKC
NETEAMLYTKPSNVTQEDWDKALTNKPNANVIPVEVKGFEDINQRHNLQRDHVAQARIIL
SQILEKLTNVSQKHELDTAARILKAQARNSKIQHRIMRLATQIAVLKNKGLPLSVQEETL
VSEFRKLLDRSNDPSGLGKNNELWARLAVLKERVRTLSNQLDSTLVVIAENGGGKTTSYG
SIDDHHIDGDERRVDEEVSSRVNKIADILANQQRGLIYLNDVLDKDMQSVDKYFKK
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtttaatttcgggggtaatactgctgctacttctggttctgccacttcgggtgctggt
ttatttggcgccaagcctgcagcaggtggttttagttttggtagcaattccaatgcgtct
caaaatactggtggtggtttattttctaatccatctaatacaacaggcgttcagggcaat
acaggtggtgggttatttgggagtatgcaaaatactcaaacgggtacgaatggagtgagt
ttgtttggtagcggttctacaacgcaaacggggacaggtggtggtttatttggacagagt
aacaataaccagaataattcggcaattgggggtgttccagctgctcagggacagcaaggt
aatatggtgggtggagctgtaggtgctggtattggtgttggtggcggtggtggtggcggt
ggtgcattgtttggacaatcttctaatccatctcaaaatcccccttctctaacagggttg
tttaatagtcatccaaatagcggtacaagcaccctcaaccaaaattctgccgttggtggc
atgaataatggattatttgggtctaacattggttcaaacaacaataattctaactcggga
acgttatttggccagaataatgctccttccaatactgggactggtttgtttggccagaac
accatatctgcacaaacaggtggaggtatgtttggccaaaataacgcatctatgcaacag
ccgcagcaacaatcctcagggttgtttggctcaacagcactgagtaacacgcagccatca
tttgcgtggtcccagcagcagccttcaaatcagtctgtgaataacaaccaacagcaacag
cagcaacagcaacagcaacagcaacaggagcaacagcaacaacaacagcaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaactacagtttcaaacgcagatgcaa
atgcagatgctgcattcaaactacccccaacagattcaagaacaaatattaaagtgcaga
gattcatgggacccaagtagccaaagatctaaattgagaacttttgtttataacaagtgt
aatgagaccgaagcgatgctgtataccaaaccgtcaaatgtaacacaggaagattgggat
aaagcgcttacgaacaagcctaatgcgaatgtgattcctgttgaggtcaagggctttgaa
gatataaaccagcgccacaaccttcagagggatcatgtcgcccaagcacgaatcattctt
tcacagatcttagaaaagttgaccaatgtttcccaaaagcacgaattggacactgccgca
agaatcctcaaagcccaagcacggaactccaaaatccaacatcgtattatgagactggct
acacaaattgctgtcctgaaaaataaaggcctaccattgagcgtgcaagaagaaacattg
gtatctgaatttagaaaactcttggatcgcagcaatgacccatcagggttaggcaaaaac
aacgagctatgggcccgtctagctgtactcaaagaacgtgtcagaactctcagcaaccaa
cttgatagcaccttagttgtcattgcagaaaatggtggcggcaaaacaacctcttatggg
tcgatcgacgatcaccacatcgacggagacgaaagacgtgttgatgaagaagtctctagt
cgtgtaaacaaaattgctgacatcctagccaaccaacaacgcggcttgatttacttgaat
gacgttctagacaaagacatgcaaagtgtcgataaatacttcaaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system