KEGG   Erysipelothrix rhusiopathiae Fujisawa: ERH_0922
Entry
ERH_0922          CDS       T01525                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
erh  Erysipelothrix rhusiopathiae Fujisawa
Pathway
erh03030  DNA replication
erh03430  Mismatch repair
erh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:erh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ERH_0922 (dnaE)
   03430 Mismatch repair
    ERH_0922 (dnaE)
   03440 Homologous recombination
    ERH_0922 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erh03032]
    ERH_0922 (dnaE)
   03400 DNA repair and recombination proteins [BR:erh03400]
    ERH_0922 (dnaE)
Enzymes [BR:erh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ERH_0922 (dnaE)
DNA replication proteins [BR:erh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ERH_0922 (dnaE)
DNA repair and recombination proteins [BR:erh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ERH_0922 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB tRNA_anti_2
Other DBs
NCBI-ProteinID: BAK31977
Position
complement(979424..982489)
AA seq 1021 aa
MATHLMVRSHYSLLKGMMPVELICEKAKHNESKSIALTDRHVLFGALDFYDAARKHHIKP
IYGMEITILEDESYYDSLVLARTNEGYQGLIHLSYLLSKQAYISEVDVVPFESELIFIAY
SEQGPFEKGMLSKNLDEVANTMERLKKMFSYFYIGLSHQESGFFSNVNDQLRQMAVLREI
ECVALPKVYYENKDDEEAFRALQAIDKSTYLEDKTLVSSPNRNFISDDDFKVLYTEAELS
LTDTIAEMCNVSIMNLKTELPEFETHQDVSNKVFLEQLSHFGLKRRLNNSVPEKYRERLN
YELKIINEMNFTDYFLIVYDVIRYAKKEGIYVGPGRGSSAGSLVAYCLGIVEIDPIEYDL
LFERFLNPERVSMPDIDIDFPDDKRQYVIDYVRNKYGDDYVAHIVTFGTLKARQAFRDTA
RVLQVPIRKVDQVSKLIDPMMGLRDNYNKNSRFKSLIQSEDLLKKTFELACKIEGMPRHT
STHAAGIVLSKKPLDVVVPVIQLDSETKAVQYEMSHLESIGLVKIDFLGLRNLTIIDNIS
RQINESEAFDIMSIPLDDQKTYELISRAETVGVFQLESDGMKALLKKVKPHKFSDIVDTV
ALFRPGPMENIPLYLENRDHPEKVKYIHDDLKRITESTNGILIYQEQIMQVAQIMAGFSL
ARADILRKAMGKKNAKELDGLKTEFIQGCIDKGHKETFAEELFSLIYKFANYGFNKSHSV
AYGLIAYQLSYLKANYPHLFYTYLLTSVIGSEVKTRQYIDECRRRKVDLRPVNLEQSRNS
YTLEGYAIRLPFTVIKGISKSIGTKIQNEVHDNGPYLNYYNAISRLNLVGIKKNQFELLI
QAGAFDYLNSDRLSMIASLEEALRYANIIRVEKDGQSSLNMDLISEPIFTVVSENRRQVL
NDELVVLGFYFSEHPTLRLKKKHESDSLIEVKVRDKYFRIIAMVDRIKLHRTKKGDQMAF
IQLSDDTGLIDGVVFPSVYDKIKVNLEIGALVLVKGQMREPGSLIIMDMYRFDSKPEFHE
S
NT seq 3066 nt   +upstreamnt  +downstreamnt
atggcgacacacttaatggtccgcagtcattattctcttttaaagggaatgatgcctgtt
gaattaatctgcgaaaaagcaaaacataatgaatcaaagagcatcgccttaacagatcgg
catgttctttttggtgcattagatttttatgatgcagcacgtaaacatcatattaaaccg
atttatggcatggaaattacaatcttggaagatgagtcttattacgattcattagtgctt
gcacgaacaaacgaggggtatcaaggcttaatccatttatcatatttactctcaaaacaa
gcttatatttccgaagtagatgtagtgccttttgaatctgaattaatatttatcgcgtat
tcagaacaaggtccatttgaaaaaggcatgttgagtaaaaatcttgatgaggttgcgaat
acgatggaacgtttaaaaaagatgttttcatatttttatattggtttatcccatcaagaa
tccggattcttttcaaatgttaatgatcagctccgacaaatggctgttttacgtgaaatt
gaatgtgttgcacttcctaaagtgtattatgaaaataaagacgatgaggaagcgtttcga
gcactacaagcaatcgataagagcacgtatttagaagataaaacgcttgtgtcttcgccg
aatcgaaactttattagtgacgatgattttaaagttctttataccgaagcagagctatca
ctgactgatacaatcgctgaaatgtgtaatgtgtcaattatgaatcttaaaacggagtta
ccggaatttgaaacccatcaagacgtaagtaataaggttttcttagaacaactaagtcac
tttggtttgaaacgaaggttaaacaattctgttccagaaaaatatcgtgaacgcttaaat
tatgagctgaaaattatcaacgagatgaattttaccgattatttcttaattgtttacgat
gttattcgttatgctaagaaggaggggatttatgtaggaccagggcgtgggagttctgca
ggttcacttgtcgcatattgcttgggtatcgtcgaaattgatcccattgaatacgacctg
ttgtttgaacgttttttaaacccagaacgtgtttcaatgccggatattgatattgatttt
ccggatgataaacggcaatacgtaattgattacgtgagaaataaatatggtgatgattat
gttgcgcacattgtaacctttgggacacttaaagcacgtcaagctttccgtgatacagca
cgtgttttacaagttcccattcgtaaagtcgatcaagtatcaaagttgattgatccgatg
atgggattaagagacaattataataaaaacagtcgatttaaatcgcttattcaatcagag
gatcttttgaaaaagacctttgaactcgcatgtaaaatagaggggatgccaagacatact
tcaacgcatgcggcaggtattgttttaagcaagaagccgcttgatgttgttgttccagtt
attcagttggattcggaaacaaaagcggttcaatacgagatgagtcatcttgagtccatt
ggtcttgtgaaaattgattttttaggtttgagaaatctaacaattattgataatattagt
cgacaaattaatgaatccgaagcatttgatattatgtcaattccattggatgatcaaaaa
acgtacgaactaatatcacgggcagagacggttggtgttttccaactcgaatcggatgga
atgaaggcgcttttaaagaaagttaaaccacataagtttagtgatatcgtcgatacagtc
gcactatttagaccgggtccaatggaaaatattcccttgtacttggaaaatcgcgatcat
ccagaaaaggttaaatacatccatgatgacttgaagagaattacagaaagtaccaatggc
attctgatctatcaagaacagatcatgcaagttgctcaaatcatggctggatttagttta
gctcgagcagatattttacgaaaagcaatgggtaaaaagaatgctaaagaacttgatggt
ttaaaaacagaattcatacaaggatgtattgataagggccataaggaaacatttgcggaa
gaacttttctcgcttatttataaattcgcaaactatggttttaataaatctcactccgtc
gcgtatgggttaattgcttatcaattgtcatatttaaaggctaattatcctcacttgttc
tatacgtatcttttaaccagtgttattggtagtgaagttaaaacacgccaatacattgac
gaatgtcgacgacgaaaggtcgatttgcgtcctgttaatctagagcaaagccgtaacagt
tatacacttgagggctatgcaattcgtttgccatttaccgttattaaaggtattagtaag
agtatcggtaccaaaattcaaaatgaggttcatgataatggtccgtatttaaattactat
aatgccatcagtcgtttaaaccttgtaggaattaagaaaaaccagtttgaattacttatt
caagcgggtgcatttgattatttaaattcagatcgtctaagtatgattgcatcacttgaa
gaggcattgcgctatgcgaatatcattcgtgttgaaaaagatggtcaatcatcattaaat
atggatttaatcagtgaacccatttttacagtggtatctgaaaatcgaagacaagtttta
aatgatgaattggttgttttaggattttatttcagtgaacatccaaccttacgtttgaag
aaaaagcatgaatcggattcgctgattgaggtcaaagttcgtgataaatattttagaatc
atcgccatggtcgatcgaattaagctgcatcgaaccaaaaaaggggaccaaatggccttt
attcagttaagcgatgatacaggtttgattgatggagtggtatttccgtcagtatatgat
aaaataaaagtgaacctagaaataggagcacttgtcttagtgaaggggcagatgcgtgaa
ccaggatctttgatcataatggatatgtatcgatttgattcaaaaccggagtttcacgaa
tcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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