KEGG   Erwinia sp. Ejp617: EJP617_00930
Entry
EJP617_00930      CDS       T01935                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
erj  Erwinia sp. Ejp617
Brite
KEGG Orthology (KO) [BR:erj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:erj03021]
    EJP617_00930 (rpoE)
Transcription machinery [BR:erj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EJP617_00930 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: ADP09774
Position
complement(106977..107552)
AA seq 191 aa
MSEQLTDQVLVERVQKGDRKSFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPTSDVDAIDAENFESAGALKEISNPEN
LMLSDELRKIVFRTIETLPEDLRMAITLRELDGLSYEEIAVIMDCPVGTVRSRIFRAREA
IDNKIQPLIQR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttaacggatcaggttctcgttgaacgagtacagaaaggcgatcggaag
tcatttaacttactggtagtgcgctaccagcacaaagtggcgagtctggtgtcccgttat
gtcccgtcaggagacgtgccagatgtggtacaagagtcgtttattaaagcctatcgtgcg
ctggattcattccggggtgacagtgctttctatacctggctctatcgcatagccgtcaat
acggccaaaaattacctggttgcccaagggcgacgccctccaaccagcgatgtcgatgct
atcgacgccgaaaacttcgaaagcgctggtgcgctaaaagaaatatcgaaccctgagaat
ttaatgttgtcagatgagttgagaaagatagtttttcgtaccatcgagacattacccgaa
gatttgcgtatggccatcaccctgcgtgaactcgacggcctgagctatgaagaaatagcc
gttatcatggattgcccggtgggtacggttcgttcccgtatttttcgtgcccgagaggct
attgataacaaaattcaaccacttatccaacgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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