KEGG   Erythrobacter sp. KY5: CD351_08675
Entry
CD351_08675       CDS       T05511                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
erk  Erythrobacter sp. KY5
Brite
KEGG Orthology (KO) [BR:erk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erk03032]
    CD351_08675 (topA)
   03400 DNA repair and recombination proteins [BR:erk03400]
    CD351_08675 (topA)
Enzymes [BR:erk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CD351_08675 (topA)
DNA replication proteins [BR:erk03032]
 Prokaryotic type
  DNA Topoisomerases
   CD351_08675 (topA)
DNA repair and recombination proteins [BR:erk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CD351_08675 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: AWW74498
UniProt: A0A2Z4K0Q7
Position
1847699..1850275
AA seq 858 aa
MQLVIVESPAKAKTIEKYLGSDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQS
RFKEIADAAKGASRLVLATDPDREGEAISWHVQELLKKRKALPTKVDRVTFNSITKSAVT
EAMKSPRELDQPLIDAYLGRRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVDRE
REIEAFRPDEYWSVLAHLEQDGTAFDARLVRYKGEKLEKLSLGAEGIAMEAKAAVEGGRF
TVEDVEKKPLKRNPAPPFTTSTMQQEAARKLGFSASHTMRLAQSLYEAGAITYMRTDGVQ
MDPGAINACRDAIGEKFDAAYLPEKPRFYSTKAKNAQEAHEAIRPTNFSRDRAGSGDEAK
LYSLIWKRAMASQMSTAQLERTTVTLRDATGQHELRATGQVVVFPGYFAIYQEGLDDQDD
DEDGILPVLKKGDVPAKTGVEATQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRDYVRMEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEDELDTVSDGREDYKELL
AKFWADFKPKADEVMEKMPSEVTEVLDEYLSDYLFPPREDGKDARYCPLCDAEGRSGGRL
ALRGGRNGAFIACANYPECKFTRGFGPPREDGDDAVQDGVMGQHPETGADIHRKSGRFGP
YVEMEVDEKKQRASIPKDVDDFDLEWAIRLLDLPRIIGAHPETGKEIEAAIGRYGPYLRH
DGKYANLKTTQDVFDTGMNAAVMLLAEAAERKGRGRAKAEPIKTLGEHPTSGGEIKVMPG
RYGPYVTDGTTNATIPKDIKPEDIEAAQAIELIDARAAKGPAKKKGRKKAAPKKKAAPKK
TAAKKAPAKKKAAAKTDG
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgcagcttgtcattgttgaatcgcccgccaaggcgaaaactatcgagaaatatctgggc
tccgatttcaaggtgctcgcaagctacggtcacgtccgcgacctgccgcccaaggatggc
agcgtgcgcccggacgaagacttcgccatggattgggagctttaccgcgacaagcagagc
cgtttcaaagaaatcgcggatgccgccaagggcgcatcgcgcctcgtgctcgcgactgac
cccgaccgcgagggcgaggcgatcagctggcacgttcaggaactcctgaagaagcgcaag
gcgctgccgaccaaggtagaccgcgtcaccttcaactcgatcaccaaatctgccgttacc
gaggcgatgaagtctccgcgcgaactcgatcagccgctgatcgacgcctatctgggacgc
cgcgcgctcgattatctgttcggctttacgctctcgcccgtcctgtggcgcaagctgccg
ggtgcaaaatcggctggccgtgtgcaatccgtggcactacgcctcatcgtcgaccgcgag
cgtgagatcgaagccttcaggcccgacgaatactggtcggttctcgctcatctggagcaa
gacggaaccgctttcgatgcgcgtcttgtgcgctacaagggtgaaaagctggagaagctc
tcgctcggggccgaaggcatcgcgatggaagcgaaagccgccgtcgaaggcgggcgcttc
acggtcgaggatgtcgagaaaaagccgctcaagcgtaatcccgcgcctccgttcaccacg
tcgaccatgcagcaggaggccgcgcgcaaactcggcttttccgccagccacacgatgcgg
cttgcccagtcgctttatgaggcaggcgcgatcacttacatgcgtaccgacggggtgcag
atggatccgggcgcgatcaacgcctgccgcgacgccatcggcgagaaattcgatgccgcc
taccttcccgaaaaaccgcgcttttacagcaccaaggccaagaatgctcaggaagcgcac
gaagcgatccgtccgaccaatttcagccgcgatcgcgcgggcagcggcgatgaggcgaag
ctctattcgctgatctggaagcgcgccatggcgagccagatgtccaccgcacagcttgaa
cgcacgaccgtcaccctgcgcgatgccaccggccagcacgaacttcgcgccaccggtcag
gtcgtcgtattccccggctatttcgcgatctatcaggaaggcctcgacgatcaggacgat
gacgaggacggcatcctgcccgtgctcaagaaaggcgatgtgcctgcgaagaccggagtg
gaggctacccagcatttcacgcagccaccgcctcgtttttccgaagcttcgttggtcaag
cgcctcgaagagcttggtatcgggcgtccttcgacttacgcctcgaccattcagactcta
cgcgatcgcgattacgtgcgcatggaaaagaaccggtttttcgctgaggaatcgggccgc
ctgctgaccgccttcctcgaacgattcttcccgacctatgtcgcttacgatttcacggcg
ggcatggaagatgaactcgacacggtctccgacgggcgcgaggattacaaggaattgctc
gccaagttctgggcagacttcaagcccaaggctgacgaggtcatggagaaaatgccttcg
gaagtgaccgaagtgctcgacgaatatctctccgattacctcttccccccgcgtgaggac
ggcaaggatgcacgctattgcccgctttgcgatgccgaagggcgttcgggtggcaggctc
gcgcttcgcggtggccgcaatggcgctttcatcgcgtgtgcaaattaccccgagtgcaag
ttcacccgcggtttcggccctccacgcgaggacggagacgatgcggtgcaggacggcgtc
atgggccagcaccccgaaaccggcgcggacatccatcgcaagtcaggccgcttcggcccc
tatgtcgagatggaagtcgacgagaaaaaacaacgcgcctcgatccccaaggatgtcgac
gatttcgacctcgaatgggcgatcaggctgcttgacctgccgcgtatcatcggtgcccac
ccagaaaccggcaaagagatcgaggccgcaatcggtcgctatggcccttatctgcgccac
gatggcaaatatgccaatctcaagaccacgcaggacgttttcgacaccggcatgaacgcc
gcggtcatgctgctcgccgaagcggctgagcgaaaggggcgagggcgggccaaggcggaa
ccgatcaagacgctgggcgaacaccccaccagcggcggcgagattaaggtcatgccgggc
cgctatggcccatatgtgaccgatggcaccactaacgcgacgatccccaaggatatcaag
cccgaagatatcgaggcggcccaggccatcgaactgatcgacgcgcgcgcggctaagggc
cctgccaagaagaaaggccgcaagaaagctgcgccgaagaagaaggcagcacccaagaaa
acggcggcaaaaaaggcgccggccaagaagaaggcggcggcgaaaaccgacggctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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