KEGG   Agathobacter rectalis DSM 17629: EUR_19180
Entry
EUR_19180         CDS       T02587                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ert  Agathobacter rectalis DSM 17629
Pathway
ert03030  DNA replication
ert03410  Base excision repair
ert03420  Nucleotide excision repair
ert03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ert00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EUR_19180
   03410 Base excision repair
    EUR_19180
   03420 Nucleotide excision repair
    EUR_19180
   03440 Homologous recombination
    EUR_19180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ert03032]
    EUR_19180
   03400 DNA repair and recombination proteins [BR:ert03400]
    EUR_19180
Enzymes [BR:ert01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EUR_19180
DNA replication proteins [BR:ert03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EUR_19180
DNA repair and recombination proteins [BR:ert03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EUR_19180
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EUR_19180
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc XPG_I HHH
Other DBs
NCBI-ProteinID: CBK90950
Position
complement(1951991..1954702)
AA seq 903 aa
MSEKLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDV
HAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVR
AEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFID
VKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEYWEQAL
MSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNVEAPKNNA
EEHFVIVRDLKTAESVFEKAKGREVAFAVVPGESLENSESDGQLSLFSEPVSNDYLAVSI
CFSEEDIYFICTGDEISSSFLDEKLNTLEVKSWISPDLKTNLHRFKSKEIKADDRGRYFD
MMVAAYLINPLVGEYPYDAVAKDYLGLMLSSKKDYLGKLDFTQMMKEDEKKAVDCACYEV
YTAWKSKPVLLQKLKEMDMLTLYRDIELPLVFVLYDMENEGIRADGIKLKEYGDKLAVSI
TELEKKIYEAAGEEFNINSPKQLGVILFEKLGLPNEKKTKTGYSTAADVLEKLAPEYPIV
ADILEYRQLTKLKSTYADGLSGYIASDGKIHTTLNQTITATGRLSSTEPNLQNIPIRIEL
GKLIRKVFLPEEGDLFVDSDYSQIELRVLAALSGDERMIEAFKNGQDIHRSTASLVFDTP
FDEVTDLQRRNAKAVNFGIVYGISAFGLSNDLGISRKEAQGYIDSYFVKYPKIKEFLDQT
VLDAKKNGYTKTMFGRIRPIPELNSSNFMQRQFGERVAMNSPIQGTAADIIKIAMIRVHD
RLLDEGLKSRLILQVHDELLIETKEAEKDKVIKLLEKEMRGAVNMKVSMEVGTECGYDWY
DAH
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgagtgaaaagcttgtacttatagacggacacagtattttaaacagggcatatcacggg
ctgcctgatctgaccaattcagagggacttcacacaaatgcagtctatggttttttgaat
atcatgttcaagattcttgacgaggaaaagccagactatctgacggtggcatttgatgtg
catgcgccgacgtttcgccacagaatgtttgatgcgtacaagggcacgagaaagcctatg
gacgaggagctcaggcagcaggtgcctatgataaaggaaatgcttactgccatgggcatt
aaaatcgtggaaaaggaaggctatgaggccgacgatatacttggaaccttatctgtcagg
gcagaaaaggccggtatggatgtcgccataatctccggagacagagacctcttacagctt
gcgacagaccatgtcatggtaaggattccaaagacaaagaaaacaggaaccgagatagaa
aactacaatacagcagatgttatcgaaaagtacggcgtcactccaaaggagtttatcgat
gtaaaggctctgcagggagatacgtctgataatattcccggggtacccggtatcggcgaa
aagacagcaggcgcacttatagcaaaataccactgtatagaggcagtacatgaggacgct
gagaatgtaaagccgccaagggcttcaaagaatatagtggagtattgggagcaggcgctt
atgagcaaggagcttgcgacaatcatacttgatgcgccggttgactatgaattttctgat
gcaaagcttagtggcggagtagagtcactctacactgaggaagcctttttactgtgcaaa
agatacgaattcaaaaacatgctgtcacggtttaacgtggaggctcctaaaaacaatgcc
gaggagcattttgtgatagtaagggacttaaagactgcagagagtgtgtttgagaaggca
aagggcagggaggtcgcttttgcggtagtaccgggagagtctttggaaaacagcgaaagt
gatggacagctaagtctgttttcggagccggtttctaacgattatcttgctgtttcgatt
tgtttttcagaggaggacatttattttatctgtacaggtgatgagatttcaagcagcttc
ctggatgaaaaattaaatactctggaagtaaagtcatggatatcaccggatttaaagacc
aatctgcacagatttaagagcaaagagataaaggcagatgacagaggcagatattttgac
atgatggtggctgcataccttatcaatccgcttgtcggggagtatccctatgatgcggtt
gcaaaggactatctggggcttatgctctcatctaaaaaggattatctgggaaagcttgat
tttactcagatgatgaaggaggatgagaaaaaggcagtggactgtgcctgctacgaggtg
tatactgcctggaaatcaaagccggttcttttgcagaagctaaaggaaatggatatgctc
actctttacagagatatcgagctgccactcgttttcgtactgtatgatatggaaaatgag
ggcataagggctgatggaataaagcttaaggagtatggagacaagcttgctgtttcgata
actgagcttgaaaagaaaatatatgaggcagcaggtgaagagtttaatataaattcgcca
aagcagcttggagtcattctctttgaaaagcttggactgccaaatgaaaagaagacaaag
accggttattctactgcggcagatgtgcttgaaaagctggcaccggagtatccgattgtc
gcggatatattggaatacagacagctcacaaagctaaagagcacatatgctgacggactt
tcgggatatattgcatccgatggcaaaatccatactaccttaaatcagacaatcactgcg
acaggccgtctttcaagcacagagcctaatctgcagaatatcccgataaggattgagctg
ggcaagcttatcagaaaggtatttctgcctgaggagggagatctgtttgttgactcagac
tactcgcagatcgagcttcgggtgctggcagcgctttccggggatgaaaggatgatagag
gcctttaagaatggtcaggatatccacagaagtacagcatcccttgtgtttgacacaccg
tttgatgaggtcacagaccttcaaagacgaaatgcaaaggctgtaaattttggtatcgta
tatggtatcagcgcgtttggtctgtctaacgacctggggatttcaaggaaagaggcacag
ggctatatagacagctattttgtcaaatatccaaagattaaggagtttttggatcagacg
gttttggatgccaagaaaaatggctatacaaagaccatgtttgggcgtatcagaccgatt
cccgagctgaactcgagcaatttcatgcagagacagtttggagagagagttgcaatgaat
tcacctattcagggtacagcagccgatatcataaagattgccatgatacgtgtgcatgac
aggcttcttgacgagggcttaaagtcaagacttatccttcaggtgcatgatgagctttta
attgagacaaaggaagctgagaaggataaagtgattaagcttctggagaaagagatgcgt
ggtgcggtgaacatgaaggtatccatggaggtgggcaccgagtgtggctatgactggtat
gatgcgcattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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