KEGG   Ehrlichia ruminantium Welgevonden (South Africa): Erum2990
Entry
Erum2990          CDS       T00224                                 
Symbol
probable_rpoZ
Name
(GenBank) putative DNA-directed RNA polymerase omega chain
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
eru  Ehrlichia ruminantium Welgevonden (South Africa)
Pathway
eru03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Erum2990 (probable_rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eru03021]
    Erum2990 (probable_rpoZ)
   03400 DNA repair and recombination proteins [BR:eru03400]
    Erum2990 (probable_rpoZ)
Enzymes [BR:eru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Erum2990 (probable_rpoZ)
Transcription machinery [BR:eru03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Erum2990 (probable_rpoZ)
DNA repair and recombination proteins [BR:eru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Erum2990 (probable_rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 PIN7 Pex26
Other DBs
NCBI-ProteinID: CAH58016
UniProt: Q5HBN0
Position
complement(521892..522290)
AA seq 132 aa
MARLTVEECMGRTNNKFKLVILASQRAHDLNSGASPVVKHKNSKNTIIALTEIANEQLDV
HLLFNLAVQRCRKYMEKFINSDDSYVVHKSKDNIDIFQKNATSNFDELGANSLNVENSKF
LDGDNFFLTQKE
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcacgtcttacagttgaagagtgtatgggacgcactaacaataagtttaagttagtt
atcttagcaagtcagagagctcatgacttaaactctggagcatctccagtagtaaagcat
aaaaatagtaagaatactattattgccttaacagagatagcaaatgaacagctggatgtg
catcttttatttaacttagcagtacaaagatgcaggaaatatatggaaaaatttatcaac
tctgatgattcatatgtggttcataagagcaaggataatatagatatttttcaaaaaaat
gcaaccagtaacttcgatgaactaggagctaattcgttaaatgttgagaattctaagttc
ttggatggagataatttttttctaacacaaaaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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