KEGG   Ehrlichia ruminantium Welgevonden (South Africa): Erum8550
Entry
Erum8550          CDS       T00224                                 
Symbol
probable_recJ
Name
(GenBank) putative single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eru  Ehrlichia ruminantium Welgevonden (South Africa)
Pathway
eru03410  Base excision repair
eru03430  Mismatch repair
eru03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Erum8550 (probable_recJ)
   03430 Mismatch repair
    Erum8550 (probable_recJ)
   03440 Homologous recombination
    Erum8550 (probable_recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eru03400]
    Erum8550 (probable_recJ)
DNA repair and recombination proteins [BR:eru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Erum8550 (probable_recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Erum8550 (probable_recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Erum8550 (probable_recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 CoV_M
Other DBs
NCBI-ProteinID: CAH58590
Position
1467707..1469464
AA seq 585 aa
MLNCNLENSEYIGVTGALWKPYDVNLRDILTIKQKFYLSEIVARILSARKINIEEISNFL
YPTLKSSLPNPFHMLDMDKAVYRICHAIHNRENIVIFGDYDVDGATSSALIKQYLSQIGV
PTTIYIPDRICEGYGPNTQALLKLKEIGNSLCITVDCGTIAHEPISAAKSVNLDVIVIDH
HIGINTLPDAVAVINPNRLDETSPYTYLAGVGVSFLMLVALHKTLKEQGFFKNNQEPNLI
NYLDLVALGTVCDVMPIIGLNRTFVKQGLKIMTTRQNLGLKTLSDVIGLEEKPNIYQLGF
NIGPHINAGGRVGNASLGARLLSTNNEEEALEISEKLQNFNLERKTLENQSFNEAVEQIE
ATIISSNIIIATGNWHPGIIGIVAGRLKDKFFLPSIVISLENGIGKASARSIPDVDLGAA
ILEAKALGIIIEGGGHAMAAGFSIQENKIKILHEFLSQKFHNINTRKVFKVDGIVTAEAI
NLKLWKELQFLEPFGIGNPEPRFILTNIRIKNSEVIGESHIRCLIYDNKTFIKGICFRCI
GTELGTTLLECTTTTLLGKISINYWRGNENIQFIIEDALQHNQIR
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgttaaactgtaatctagaaaactcggaatatatcggagtaacaggagcattatggaaa
ccatacgatgtaaatctgagagatattttaacaatcaagcaaaaattttacctttctgaa
attgttgcaagaatattatctgcaagaaaaattaatatagaagaaattagtaatttttta
tatccaactctaaaatcatctctacctaatccttttcacatgttagatatggataaagca
gtatacagaatttgtcatgcaatacataatcgagaaaacatagtaatctttggagactat
gatgtagatggagcaacatcatctgcattaataaaacaatatctatcacagataggagta
ccaacaacgatatatattccagatcgtatatgtgaaggatatggaccaaatacacaggcc
ttactaaaattaaaagaaataggaaatagtctatgtataaccgtagactgcggtactata
gcacatgaaccaatatccgcagcaaagtcagtaaatcttgatgttatagttatagatcat
catataggaattaatactttaccagatgcagttgcagtaatcaatcctaatcgcttagac
gaaacatccccctacacatatctagcaggagtaggcgtatcttttttaatgttagtagca
ctacataaaactttaaaagagcaaggattttttaaaaataatcaagaaccaaatttaata
aattatttagatttagtagcactaggaactgtatgtgatgttatgcctattataggacta
aataggacttttgtaaaacaaggtctaaagattatgacaacaagacaaaatctaggcctt
aaaacattatctgatgtaattggattagaggaaaagccaaatatttatcaactgggattt
aatataggaccacatataaatgcaggaggaagagtaggtaatgctagcctaggagcaaga
ttattatcaaccaacaatgaagaagaagcattagaaatttcagaaaaactgcaaaatttc
aatttagaaagaaaaacattagaaaatcaaagcttcaatgaagcagtagaacaaatagaa
gctactataatatcaagcaatataattattgctacaggaaattggcatccaggaataata
ggtattgttgcaggaagattaaaagataaatttttcttaccaagtatagtaatatcactt
gaaaatggtattggtaaagcaagtgctaggtcaattccagatgtagatttaggcgcagct
attttagaagcaaaagccctcggaataataatagaaggaggaggacatgctatggctgca
ggattttcaatacaagaaaataaaatcaaaatattacacgagtttctatcacaaaagttc
cataatatcaatacacgaaaagtatttaaagtagacggtattgtcactgcagaagctatc
aatttaaaattatggaaagaattacaatttctagaaccatttggcataggtaatcctgaa
ccaagattcattctcacaaatatcagaataaaaaattcagaagttataggagaaagtcat
atcagatgtttaatttacgataacaaaacatttataaaaggaatttgttttagatgtatc
ggcacagaattgggtaccactttactagaatgtactactaccacattactaggaaaaata
agtataaattactggagaggtaatgagaatatacaatttataatagaagatgctttacag
cataaccaaataaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (661)   
   KEGG ORTHOLOGY (1)   
   RefGene (658)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (671)   

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