KEGG   Erwinia sorbitola: GN242_17040
Entry
GN242_17040       CDS       T06366                                 
Symbol
ldcC
Name
(GenBank) lysine decarboxylase LdcC
  KO
K01582  lysine decarboxylase [EC:4.1.1.18]
Organism
erwi  Erwinia sorbitola
Pathway
erwi00310  Lysine degradation
erwi01100  Metabolic pathways
erwi01110  Biosynthesis of secondary metabolites
erwi01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:erwi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    GN242_17040 (ldcC)
Enzymes [BR:erwi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.18  lysine decarboxylase
     GN242_17040 (ldcC)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: QGU88821
UniProt: A0A6I6EQ03
Position
complement(3731824..3733974)
AA seq 716 aa
MNIIAIMGPHNAFYKDEPIRELDITLKSQGFQTIYPHDASDLLKLIEHNPRICGVVFDWD
EYSLDLCSEINLLNEYLPLYAFINTHSTMDVSINEMRMTIWFFEYALNAADEIAQRIRQY
TDEYIDTITPPLTKALFTYVKEGKYTFCTPGHMAGTAFQKSPVGSLFYDFFGANALKADI
SISVTELGSLLDHTGPHLEAEEYVARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTMLV
DRNCHKSLTHLLMMSDIIPIWLKPTRNALGILGGIPKREFTKESIALKVAQTPRASWPVH
AVITNSTYDGLLYNTQYIKETLDVPSIHFDSAWVPYTNFHPIYQGLSGMSGERTPGKVIY
ETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTSPNYAIVASIETAAAMLRGNP
GKRLINRSVERALHFRREVQRLREESEGWFFDIWQPEGVDEPECWPIQPGEEEWHGFRDA
DADHMYLDPIKVTILTPGMSELGEMAEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSI
GIDKTKAMSVLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLARGIHTLIRQ
HDLPRLMLQAFATLPEMKLTPHHMFQQQVKGNIETVDISELVGRVSANMILPYPPGVPVV
MPGEMITEQSRAVLDFLLMLCAIGKHYPGFETDIHGAKLTDEGQYLVRVLKNDVEI
NT seq 2151 nt   +upstreamnt  +downstreamnt
ttgaatattatcgcgatcatgggaccgcataacgcattctacaaagatgaacccatccgt
gagctggatatcactttaaaaagccagggctttcagacgatctacccgcacgacgccagt
gacctgctgaagctgattgaacataatccacgtatctgtggtgtcgtgtttgactgggat
gagtacagcctcgatctatgcagtgaaatcaatctgctcaacgaatatctgccgctgtat
gcctttatcaacacgcactcaacgatggatgtcagcattaatgaaatgcgcatgaccatc
tggttctttgaatatgccctgaacgccgccgatgagatcgcccagcgcatacgtcagtac
accgatgaatatattgataccattacgccccccctgacgaaggcgctgttcacctatgtg
aaagagggcaaatacaccttctgcacgcctggacatatggcgggaaccgcattccagaaa
agcccggtcggcagtctgttttatgattttttcggagccaatgccctgaaggcggatatc
tcgatttccgtcactgaactgggttcgctgcttgatcacaccgggccacacctggaagcc
gaagagtatgtcgcgcggactttcggtgccgagcagagctatatggtcaccaatggcacc
tcgacctccaataaaattgtcggcatgtacgctgccccggcgggcagtacgatgctggta
gatcgtaactgccataagtcgctcacccacctgttaatgatgagcgatattattcctatc
tggctgaagccaactcgtaatgcgctgggtattcttggcggcatcccgaaacgtgagttc
accaaagagagtattgcgctgaaagtggcgcaaacacctcgcgccagctggccggtgcat
gcggtgatcaccaactctacctacgacgggctgctgtacaatacgcagtacattaaagag
acgctggatgtgccatcaattcactttgattctgcctgggtaccctataccaacttccat
ccaatttatcaggggctgagtggcatgagcggggagcgcacgccgggtaaggtgatttac
gaaacccagtcgacgcataaactgctggctgcattctcgcaggcctcgctgatccacatt
aaaggcgactacgacgaacagacctttaatgaagcctacatgatgcacaccaccacctca
cctaactatgcgattgttgcttctatcgaaacggcggcggctatgctgcgcggtaacccg
ggtaagcgtttaatcaaccgttcggtagagcgggcgctgcattttcgtcgtgaagttcag
cgcctgcgtgaagagtctgaaggctggttctttgatatctggcagccggaaggcgtggat
gagccggagtgctggccgatccagcccggtgaggaagagtggcacggtttccgtgatgcc
gatgcggatcatatgtacctcgatccgatcaaagtcaccatccttacacccgggatgagc
gagctgggcgagatggcagaagaggggatcccggcggcgctggtggcgaaattcctcgac
gagcgcggcgtagtggtggaaaaaaccgggccgtacaacctgctgttcctgttcagcatc
ggtattgataaaaccaaagcgatgagcgtgctgcgcggtctgaccgagtttaaacgctcc
tatgacctcaatcttcgcgtgaaaaacatgttgccggatctctatgcagaagatcctgat
ttctaccggaatatgcgtattcaggatctggcccgggggatccacacgctgatccgccaa
cacgatttaccgcgcctgatgttacaggcctttgccacactgccagagatgaagctgacg
ccgcatcatatgttccagcagcaggtaaaaggcaatatcgaaacggtggatatcagtgaa
ctggtggggcgcgtctcggccaatatgatcctgccttatccgccaggcgtaccggtggtg
atgcccggtgagatgatcactgaacagagccgtgccgtgctcgactttttgctgatgctg
tgtgccataggtaaacactatccgggctttgaaacagatattcatggcgcgaagcttacc
gatgaagggcagtatctggtacgcgtgttgaaaaatgacgtagagatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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