KEGG   Enterococcus saigonensis: EsVE80_25310
Entry
EsVE80_25310      CDS       T06615                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
esg  Enterococcus saigonensis
Pathway
esg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:esg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EsVE80_25310 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:esg03021]
    EsVE80_25310 (rpoB)
   03400 DNA repair and recombination proteins [BR:esg03400]
    EsVE80_25310 (rpoB)
Enzymes [BR:esg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EsVE80_25310 (rpoB)
Transcription machinery [BR:esg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EsVE80_25310 (rpoB)
DNA repair and recombination proteins [BR:esg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EsVE80_25310 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: BCA87008
UniProt: A0A679IBE7
Position
complement(2662700..2666314)
AA seq 1204 aa
MAGHVVKYGKHRERRSYARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFNG
NLSLEFVDYDLKEPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKSQEVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS
YVRIDRTRKIPLTVLVRALGFGSDDTILEIFGESLSLRNTIEKDLHKNASDSRTEEGLKD
IYERLRPGEPKTADSSRNLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAETLV
DPETGEIIVEKGTVLSHQEMDKLAPFLENGLNAVTYYPSEDGVVTEPMTVQVIKVFSPKD
PEREVNVIGNGYPDASVKTVRPADIIAAMSYFFNLMEGIGNVDDIDHLGNRRIRSVGELL
QNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLASYAK
VNKYGFIETPYRRVDRATGRVTDQIDYLTADIEDHYVVAQANSPLNEDGTFKEELVMARA
TSENLEVTIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPKSP
WVGTGMEYKSAHDSGAALLCKNPGVVEFCDAAEIRVRREDGALDVYSVTKFRRSNSGTSY
NQRPLVKLGEEVEKGDILADGPSMENGEMALGQNVLVAFMTWEGYNYEDAIIMSRRLVKD
DVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKNLDEMGIIRIGAEVKDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPG
VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVLELHLGMAARQLGIHVATPVFDGANDEDVWATVKEAGMASDAKTVLYDGRTGE
PFDGRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRV
LDIEDEEIELRDMDDDDDDLITVDALTKFAEQQSAKEVEQAAAAEEKTAEEDLNQEIETA
EDVE
NT seq 3615 nt   +upstreamnt  +downstreamnt
ttggctggacacgtagtaaaatacgggaaacatcgcgaacgtagaagttacgctagaatc
agtgaagtattggaattaccgaatttgattgaaattcaaaccgactcttaccaatggttt
ttagatgaaggtttacgtgagatgtttgaagacatcttaccaattgatgattttaacggt
aatttgtcactggaatttgttgattacgacttaaaggaaccaaagtacacagttgaagaa
gctcgcgcgcatgatgcaaactactctgcgccactacatgttacgttgcgtttgacaaac
cgggaaactggcgaaattaaatcacaagaagttttcttcggtgatttcccattgatgact
gaacaaggtacattcatcattaacggtgctgaacgggttatcgtatcacagttggtacgt
tcaccaggtgtttatttccacggtaaagtagataaaaatggtaaagaaggctttggttca
actgttattcctaaccggggtgcatggttggaaatggaaacagatgccaaagatatttcc
tatgtacggattgaccgtacgcgtaaaattccattaacagtattggttcgggcattaggc
tttggctcagacgatacaattcttgaaatttttggtgaaagcttatcattacgcaataca
atcgaaaaagacttgcataaaaacgcaagtgattctcgtactgaagaaggcttaaaagat
atttatgaacgtctacgtccgggggaaccaaagactgctgacagttcacgtaatcttttg
aacgctcgtttttttgatccaaaacgttacgaccttgccaatgttggtcgttataaagta
aataaaaaattagacctgaaaacacgtctattaaacttaacattagctgaaactttggtt
gatcctgaaactggcgaaatcatcgttgaaaaagggactgttttgtctcaccaagaaatg
gacaagttagcacctttcttagaaaatggcttaaatgctgtcacttactatccttcagaa
gacggtgtcgtgacagaaccaatgactgttcaagtgattaaagtattttcaccaaaagat
ccagaacgagaagtaaatgtgattggtaatggctatccagatgcttctgtaaaaacagtg
cgtccggcagatatcattgctgctatgagctatttctttaacttaatggaaggtatcggc
aatgtggacgatattgatcacttaggaaaccgtcgtattcgttctgtgggggaattgttg
caaaatcaattccggattggtttagctcggatggaacgtgtggtacgtgaacggatgtca
attcaagataccgaaacattaacaccacaacaattaattaatattcgtccagttgtagca
agtatcaaagaattctttggttcttctcagttgtcacagttcatggaccaaacaaaccca
ttaggtgagttaactcataaacgtcgtctatcagccttagggcctggtggtttgactcga
gatcgtgcgggttatgaagtgcgagatgttcactattctcactatggtcgtatgtgtcca
attgaaacccctgaaggtccaaacattgggttgatcaatagcttggcatcttacgctaaa
gtaaataaatacggctttatcgaaactccttaccgtcgcgtggaccgtgcgacaggccgc
gtaactgatcaaatcgactatttgacagccgatattgaagaccattacgttgttgcccaa
gcaaacagcccattaaatgaagatggtacgtttaaagaagaattggttatggcccgtgca
acttctgaaaacttagaagtaaccattgacaaagttgattacatggatgtatcaccaaaa
caagtagttgccgttgcgactgcatgtattcctttcttagaaaacgatgactccaaccgt
gctttgatgggtgccaacatgcagcgtcaagctgtgccattgattaatcctaaatcacca
tgggttgggactgggatggaatataaatcagcccatgactcaggtgctgctttattatgt
aaaaacccaggtgtcgttgaattttgtgatgcagccgaaattcgcgttcgtcgtgaagat
ggcgcattagatgtttactcggttacaaaattccgtcgttctaactcaggtactagctac
aaccaacgcccattagtaaaactaggggaggaagttgaaaaaggcgatatcttagctgac
ggaccttctatggaaaacggtgaaatggccttaggtcaaaacgtcttggttgccttcatg
acttgggaaggttacaactatgaagatgccatcatcatgagccgccgtttggtgaaagat
gatgtttatacttcaattcacattgaagaatacgaatccgaagcgcgtgatacaaaatta
ggacctgaagaaattacccgcgaaattccaaacgttggggaagacgcattgaagaacttg
gacgaaatggggattatccgcattggtgctgaagtaaaagacggtgacttattagttggt
aaagttacgccaaaaggtgtgacggaattatcagctgaagaacgtttattacatgctatc
tttggtgaaaaagcccgcgaagttcgcgacacgtctcttcgagtgcctcacggcggtggc
ggtatcgtccacgacgtgaaaatctttacccgtgaagccggagatgaattatcaccaggg
gttaatatgttagtgcgcgtttatattgtgcaaaaacgtaaaatccatgaaggagataaa
atggccggtcgtcacggtaacaaaggggttgtatcccgcattatgccagaagaagatatg
ccatatcttccagacggcacaccggttgacatcatgttgaatcctttaggggtgccatca
cggatgaatatcggacaagtattggaattacacttaggaatggctgcccgtcaattaggt
attcacgttgcaacaccagtattcgatggtgctaacgatgaagatgtttgggcaactgtt
aaagaagcaggtatggcaagtgatgctaaaactgttctttacgatggccgtactggtgaa
ccatttgatggacgaatctccgttggggttatgtatatgattaaactagcccacatggtt
gatgataaattgcatgcccgttcaattggaccttactcacttgtcacgcaacaaccattg
ggtggtaaagcacagtttggtggacaacgtttcggggaaatggaagtttgggcgcttgaa
gcttatggtgcagcttataccttgcaagaaatcttgacttacaaatcagatgacgttgtg
ggtcgtgtgaaaacatacgaagcaatcgttaaaggtgaaccaattccaaaacctggtgta
ccagaatccttccgcgtattagtgaaagaattacaatcattaggtttagatatgcgcgtt
cttgatatcgaagatgaagaaattgaacttcgtgatatggatgacgatgatgatgattta
attacagtagatgctttgacgaaattcgccgaacaacaatctgctaaagaagttgaacag
gcagctgctgctgaagaaaaaactgcagaagaagatttaaatcaagaaattgaaacggca
gaagacgtagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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