KEGG   Enterococcus silesiacus: ATZ33_05610
Entry
ATZ33_05610       CDS       T04218                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ess  Enterococcus silesiacus
Pathway
ess03030  DNA replication
ess03430  Mismatch repair
ess03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ess00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATZ33_05610 (dnaE)
   03430 Mismatch repair
    ATZ33_05610 (dnaE)
   03440 Homologous recombination
    ATZ33_05610 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ess03032]
    ATZ33_05610 (dnaE)
   03400 DNA repair and recombination proteins [BR:ess03400]
    ATZ33_05610 (dnaE)
Enzymes [BR:ess01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATZ33_05610 (dnaE)
DNA replication proteins [BR:ess03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ATZ33_05610 (dnaE)
DNA repair and recombination proteins [BR:ess03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ATZ33_05610 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 DUF655
Other DBs
NCBI-ProteinID: ALS00863
UniProt: A0A0S3K998
Position
complement(1216685..1220017)
AA seq 1110 aa
MPFPQLATITSYSLLSSTIRIQELVQQAKKLGYTTLGIADINVLHGAIEFYEACKKADIK
PVIGLTLEYTPQKSEQSAQLLLYAKDLKGYQNLMRISTARMNSERIFYLDEIKENLNHLF
AVMPSDKGEIPFALKRSEVEASESLAQLVQLFDPTAFFAGASFTCNPETDPALFQFYASQ
NQPLIALQETRYLSREDGFAVKVLAHINEGQQMSLNAEETEIEGPFYLRSQQDAAEQLCI
KVNKQAVSNAEKLATDCSVEIPLHQRLLPHYPIPDGKQAGDFLKELCVQKLPERVPDATI
EYEERLAKELNIIHTMGFDDYFLIVWDVMAFAHERKIVTGAGRGSAAGSLVSYVLSITDV
DPIKYDLLFERFLNPERHSMPDIDLDIPDNRREEVLQYVREKYGHYHMAQIATFGTMAAK
MVLRDVARVFGLSQSESNRWSNAVPSALKMTLKTAYTDSKKLVELVNSSETNRLLYDTAV
RLEGLPRHVSTHAAGVVISDLDLLDIVPLQPGSNDIFLTQFTMNDVEKIGLLKMDFLGLR
NLSIIDDTIKSIKRVYKKELILNQIPLDDDQTLALFRRGETSGVFQFESAGIRNVLRKLG
PTSIEDIAAVNALYRPGPMQNIDLFIRRKKGLEPIDYPDAVLEPILRNTYGVIVYQEQII
QVASTMAGFSLGQADILRRAVSKKKKEVLDEERKHFVEGAMNQGHSEEVATTIYDYIERF
ANYGFNRSHAFAYSFIGFQMAYLKVHYPGAFYAAILHSVRHNPTKIKEYIGEARKNKMAI
IQPSINSSQYSFYLNNDNQIMFGFSSLKGIRRDFIQNILDERKERGPFKSFDQFLLRIDR
KWLKAENIQPLIAIGAFDELQVNRRQLAVSLDSEIQNIIYSGGSMNLLEDTLKLKEVEIA
DYSLEEKLEQEEQYLGVYLSGHPTEEFKKTRLAKQVMLVSDVVENQTARLLIYVKDIRVI
RTKKGEQMAFVEGDDLTGSLSLTLFPTVFRTLRQNVEKNQVYFVEGKIEKSNYNQELQLL
VNQIEKASEIEKSISATTCYLKIIEAKDQKDILQSVHEVIQAHKGNTPVIIYFEKNGKKL
VLGAENWIADTVDAKEQLELILGSQNVVFK
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgccctttccacaattagcaacaattacttcctactcattactttccagtactattcgt
attcaagaactagtgcagcaagcaaaaaaattgggttatacgactttaggaattgctgat
atcaatgtgcttcacggagcaatagaattctacgaagcgtgtaaaaaagcggacatcaag
ccggttatcggtttaacgctagaatacacccctcaaaagtccgaacaatcagctcaatta
ttattgtacgcaaaagatttaaaaggctatcaaaacttgatgcggatttcgacagcaagg
atgaatagcgaaagaattttttatctagatgaaatcaaagaaaatctaaatcatttattc
gctgtgatgccttctgacaagggcgaaattccgtttgctttgaaaagaagtgaagtagaa
gcgagtgaaagtttagcccaattagtgcagcttttcgatccaactgctttttttgctgga
gcatcgtttacctgcaatccagaaacagacccagcactattccaattttacgcatcccaa
aatcaaccactcatcgccttacaagaaacgcgttatttaagtcgtgaggacggttttgca
gtgaaagttttagctcatatcaatgaagggcagcaaatgagtttgaatgctgaggaaacg
gaaattgaaggacctttttatttaagaagccaacaggatgcagcagagcaattgtgtata
aaagtaaataaacaagcggtgagtaatgccgagaaattagctactgattgttcagttgag
attccgctgcatcagcgtttattgcctcattatccaataccagatgggaaacaagcagga
gattttttaaaagagctgtgtgtgcaaaaactacctgaacgggttccagacgctacaata
gaatatgaagaacgcttagcgaaagaacttaacatcatccataccatgggatttgatgat
tacttcttgattgtttgggatgtaatggcttttgcgcatgaaagaaaaatcgtgactggt
gcaggtcgtggttctgctgcaggatctttagtgtcttacgttttatcgattacggatgtt
gacccaattaaatatgatctactttttgaacgtttcttaaatcctgaacgacattcaatg
ccagatatcgatttagatattcctgataatcgtcgggaagaagtactgcagtacgttcgt
gagaaatatggtcactatcatatggcgcaaatcgctacttttggtacaatggcagcaaaa
atggtcctaagagatgttgctagagtgtttgggttatcacaaagtgaatcgaatcgttgg
tccaatgctgtaccaagtgctttaaaaatgaccttgaaaacagcttatacggactcaaaa
aaactagttgagctagtcaattcatctgagaccaatcgtttattgtacgatactgctgtt
cgtttagaaggtcttccccgtcacgtgtcaacacatgctgcgggtgtggtgatcagtgat
ctagatctattagatattgttccgctacaaccaggttcaaatgatatattccttacccag
tttacgatgaatgatgttgaaaaaatcgggttgttgaagatggattttctaggcttaaga
aatttgtcaattattgatgatacaatcaaatctatcaagcgagtttacaaaaaggaactg
attttaaatcaaattcctttagatgacgatcaaacgttggccttgtttaggcgaggcgaa
acaagcggagtttttcagtttgaatcagcggggatcaggaacgttttaagaaaattaggc
ccaacgagtattgaagatattgcggcagtcaatgccttatatcgtccaggaccaatgcaa
aatatcgatctattcatccgtagaaaaaaagggctagaaccaatcgattatccggatgct
gtgttagaaccgattttaaggaatacgtatggcgttattgtctatcaagagcagatcatt
caagttgcttctacgatggcaggatttagcctaggacaggcggatatcttaaggcgagca
gtcagtaaaaagaaaaaggaagtactggacgaagagcgaaagcactttgtcgaaggagca
atgaatcaagggcacagtgaagaagtagcaactacgatttatgattatatcgaacgattt
gctaattatggtttcaatcgttcccatgcatttgcgtattcttttattgggtttcaaatg
gcctacttaaaagtacattatcccggtgctttttatgctgcaattctccattctgtacgg
cataatccaactaaaatcaaagagtatattggggaagcacgtaaaaataaaatggcgatc
attcaaccgtctatcaactccagtcagtatagtttttacttaaataatgataatcaaatc
atgtttggctttagttctttaaaaggaatccggcgagattttatccaaaatatcttagat
gaacgcaaagagcgcggtccctttaaatcttttgatcaatttttgcttcgaattgaccgc
aagtggctaaaagcagagaatatccaacctttgattgctattggtgcttttgatgaactg
caagttaatcgtcgtcagttagcagtcagtctagacagtgagattcaaaatatcatatat
agtggtggcagcatgaatcttttagaagacacgttgaaattaaaagaagtcgaaattgct
gattattcactggaagaaaaattagagcaggaagagcaatatttaggtgtttatttatct
ggacatccaacagaagaattcaagaaaactcgtttggctaagcaagtaatgttggtcagt
gatgtcgtggaaaatcagacggctcgtttattgatttatgtaaaagatatccgagtgatc
cgcacgaaaaaaggcgaacaaatggcttttgtcgaaggtgatgatctaacgggttcatta
tcgttaacactttttccaacagttttcagaacgttacgtcaaaatgttgaaaaaaatcaa
gtttatttcgtagaaggtaaaatagaaaaaagtaattataaccaagagctgcaactctta
gtaaatcaaatcgagaaagccagtgaaatagaaaaaagtattagtgcaactacgtgctat
ttgaaaatcattgaagcaaaagaccaaaaagacattttacaaagtgttcacgaagttatt
caagcgcacaaaggcaatactcctgtcattatttactttgaaaaaaacggtaaaaaattg
gttttaggagcagagaattggatagcagacacagtagatgcaaaagagcaattagagctg
attttaggcagtcaaaatgttgttttcaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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