KEGG   Erwinia tasmaniensis: ETA_20300
Entry
ETA_20300         CDS       T00711                                 
Symbol
ams
Name
(GenBank) Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
eta  Erwinia tasmaniensis
Pathway
eta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETA_20300 (ams)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eta03019]
    ETA_20300 (ams)
   03009 Ribosome biogenesis [BR:eta03009]
    ETA_20300 (ams)
Enzymes [BR:eta01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     ETA_20300 (ams)
Messenger RNA biogenesis [BR:eta03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ETA_20300 (ams)
Ribosome biogenesis [BR:eta03009]
 Prokaryotic type
  rRNA processing factors
   ETA_20300 (ams)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio PNPase_C S1
Other DBs
NCBI-ProteinID: CAO97076
UniProt: B2VDL3
Position
2290888..2294298
AA seq 1136 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEISREYFPSNYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLELPDGMGLIVRTAGVGKSAEAL
QWDLGFRIKHWEAIKKAADSRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS
LSILRLIEEEALKENTKEVHAIVPVQVASYLLNEKRDAVSAIEKRQGGVRAIIVPNDNMQ
TPHYSVLRVRSGEETQTLSYHLPKLHEAEMALPSEEEHAERKRPEQPALAAFVMPEAPPA
PQEAAPEKTAPKAVVKSQAPAAAQPGLISRLVSGLKKLFAAPEKSAEQPEQLVVEEKIAA
SSAPRGERRNNRRQNNRRDRNGERTERNADRGERNDRNADRNERGAERNTDRNERSAERN
TDRNERSNERNERAPRERNNEAREGRDDNRRNNNRRNGQQTDARSERMVPDEFERSETAQ
TRQPRQERQRRRPGQNQEEKSTQLQEQKVAEPVIESVQTTEEQEDSQQVMPRRKQRQLNQ
KVRIETAEQTAARSFEPQESAPVAAPVVAQPAVETDEQDERDGNNMPRRSRRSPRHLRVS
GQRRRRYRDERYPTQSPMPLAHAAASPESASGKVWISYPVSQVSDHETHEDPPHSVVPAY
GHADIAPSGAIESAPAVASVAERAAAPSVAADVAPAPEIQAAPAAAVQAESVQIAEPQPE
NQPEITPVETEETAAIDAPVDQQPAVISAADDAVAAETAAQAVPAQEVQPEAAEAQVDEV
QDVSAPLVAEASAEVKQHHALTDEPVVSAEHPSVADDAPAPVAARAETVTVAEAPEQAGR
YKHHATAPMTKAPAPDYQPEASRQSDWVRPDFNFEGKGSAGGHAATQQATAPATRP
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaataaacgcaactcagcaagaagagttgcgtgttgcccttgtcgat
ggacagcgcctgtacgacctggatatagaaagtcccgggcacgagcagaaaaaagccaac
atctataaaggtaagatcacccgtattgaacccagccttgaagccgcattcgttgactac
ggtgctgaaagacacggtttcctgcctctgaaagagatttcccgcgaatacttcccctct
aattataattctcacggtcgtccaaacattaaagacgttctgcgtgaaggccaggaagtc
attgttcagatcgataaagaagaacgcggcaataaaggcgctgcgctgaccacctttatc
agcctggcgggaagttatctggttctgatgccaaacaacccgcgtgctggcggtatttct
cgccgcattgagggcgatgaccgtaccgaactgaaagaagcgctctcttcacttgaactg
ccggacggcatgggcctaatcgtccgcaccgctggcgtgggcaaatctgcggaagcgctg
cagtgggatttaggttttcgtatcaagcactgggaagcgatcaagaaagccgctgacagc
cgccctgctccattcctgatccaccaggaaagtaacgtcattgtgcgtgccttccgcgac
tatctacgtcaggacatcggcgaaattctcatcgataacccgaaagtactggagctggct
cgccagcatatcgccgcattgggtcgtccggatttcagcagcaaaattaagctctacacc
ggtgaaattccgctgttcagccattatcaaatcgaatcacagatcgaatccgccttccag
cgcgaagtgcgcctgccttcaggcgggtcaatcgttatcgacacgaccgaagcgctgacg
gctattgatatcaactccgcccgcgcgactcgcggcggcgacatcgaagagacggcattc
aacacgaaccttgaagccgccgatgagatagcccgccagctgcgtttgcgtgacctcggc
ggcctgattgttatcgactttatcgacatgactccggttcgtcaccagcgtgcggttgaa
aatcgtctgcgcgaagcggtacgtcaggatcgcgcacgcatccagatcagccatatttcg
cgcttcggcctgctggaaatgtcgcgccagcgtcttagcccgtcactgggtgagtccagc
catcacgtctgcccgcgctgtagcggcacaggcactatccgtgataacgaatcgctgtcg
ctctctattctgcgtctgattgaagaagaagcgctgaaggagaacaccaaagaggttcat
gccatcgtaccggttcaggttgcttcctacctgctgaacgagaagcgtgatgcggttagc
gcgattgaaaaacgccagggcggcgtgcgtgcaattatcgtacccaacgataacatgcaa
actccgcactactcggtactgcgcgtacgcagcggtgaagagacccagacgttaagctac
cacctgccgaaactgcacgaagccgaaatggcgctgccctccgaagaggaacacgccgag
cgcaaacgtccagagcagcctgctcttgccgcgttcgtgatgccggaagcaccgcctgcg
ccgcaggaagccgcgcctgaaaaaaccgcaccgaaagctgtggtcaaatcgcaggctcct
gctgctgcccagccgggactgattagtcgtcttgttagcggattgaagaagcttttcgcc
gcgccggaaaaatcagccgaacagcctgagcagctggtagttgaagagaagatcgctgca
tcctctgccccgcgcggagagcgccgcaacaatcgccgtcagaataaccgccgtgaccgt
aacggtgaacgcaccgagcgaaacgctgaccgcggtgaacgtaatgaccgcaatgcggat
cgtaacgagcgaggtgccgaacgcaacaccgatcgtaacgagcgaagcgccgagcgcaac
accgatcgtaacgagcggagtaacgaacgtaacgaacgcgcgccgcgtgaacgtaacaat
gaagcacgcgaaggtcgtgacgacaatcgtcgtaacaacaaccgccgcaacggtcagcag
acggatgcgcgtagtgagcgcatggtgccggacgagtttgagcgcagcgaaaccgcccag
acacgccagccgcgtcaggagcgtcagcgccgtcgccctggtcaaaaccaggaagaaaaa
agcacgcaacttcaggaacaaaaggttgctgagccggtcatcgaaagcgtacagactacg
gaagagcaggaagacagccagcaggtcatgccgcgccgtaaacagcgccagctgaaccag
aaagtgcgtatcgaaacggctgaacaaaccgcagcgcgttcattcgaaccacaagagagc
gcacccgttgccgctcctgtggttgcccagcctgcggttgaaacggatgagcaggatgag
cgcgatggcaacaatatgcctcgtcgttcacgccgctctccacgtcacctgcgcgtgagt
ggccaacgccgccgccgttaccgtgacgagcgttatccgacacagtcacccatgccgctg
gctcacgccgccgcatcgccggaatcggcgtcaggtaaagtgtggatatcctatccggta
tcacaggttagcgatcatgaaacgcatgaagatccgccgcactcagtagtgcctgcctac
ggtcatgctgatatcgccccgtcaggagcgattgaatccgcccccgcggtggccagcgtc
gctgaacgtgctgccgcgccgtctgtggctgcggatgttgcccctgcccctgagattcag
gctgctccggccgctgctgtgcaggcggagtcggtacaaattgccgaaccacagccagaa
aatcagccggaaatcaccccggtagagactgaagaaaccgccgctattgatgcccccgta
gaccagcagcccgcggtgatctccgcagctgatgatgcggtagcggcagaaacggcagcc
caagccgttccggctcaggaagttcagccggaagccgccgaagctcaggtcgatgaagtg
caggacgtttccgcaccgctggtggctgaagccagtgccgaggttaagcagcatcacgcc
ttaacggacgagccggtagtctctgcggaacacccttccgtggctgacgatgcgcctgct
ccggttgcggctcgcgccgagactgttaccgttgcagaggccccagaacaggccggccgc
tataagcatcatgctacggcaccgatgacgaaagcgcctgctccggattaccagccggaa
gcatcgcgccaaagcgactgggtacgcccggacttcaattttgagggtaaaggttcggca
ggcggtcacgccgcaacacaacaggcgacggctccggcaacccgcccgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (52)   

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