KEGG   Edwardsiella piscicida C07-087: ETAC_01820
Entry
ETAC_01820        CDS       T02509                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
etc  Edwardsiella piscicida C07-087
Pathway
etc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:etc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETAC_01820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etc03019]
    ETAC_01820
   03016 Transfer RNA biogenesis [BR:etc03016]
    ETAC_01820
Enzymes [BR:etc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ETAC_01820
Messenger RNA biogenesis [BR:etc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ETAC_01820
Transfer RNA biogenesis [BR:etc03016]
 Prokaryotic type
  tRNA degradation factors
   ETAC_01820
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 KH_2 aRib SLS1_KH2
Other DBs
NCBI-ProteinID: AGH72497
Position
430974..433103
AA seq 709 aa
MTLLTPTVRKFQYGQHTVTLETGMMARQATAAVMVTMDDTAVFVTVVGAKKAREGQDFFP
LTVNYQERAYAAGRFPGGFFRREGRPGEGETLTARLIDRPIRPLFPEGFLNEVQVVATVV
SVNPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTMDELKQSRLDLV
VAGTDNAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENIKALAAEVGKPRWEWHAPEV
NVALQHRVAEMAEARLGEAYHITEKQARYAKVDEIKESVIADLLAEDDALDAGEISDILG
ALEKAVVRGRVLRGEPRIDGREKDMIRALDVRTGVLPRTHGSALFTRGETQALVTATLGT
ERDAQNIDELTGERTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPSQ
DAFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVL
SDILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVME
QAINAPRGDISEFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIA
ATDGDKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKR
VEKVTDYLQMGQEVAVKVLEVDRQGRVRLSIKEANASAAAGQDAPADAE
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgactttgttaacgccaaccgttcgcaaattccaatacggccagcataccgttacgctg
gaaaccggcatgatggcccgccaggccaccgcagccgtgatggttaccatggatgacacc
gcggtattcgttaccgtggtgggggcgaaaaaagcccgtgaaggtcaggacttcttcccg
ctgaccgttaactaccaggagcgcgcctacgcggccggtcgtttccccggcggcttcttc
cgccgtgaaggccgtccgggtgaaggtgagaccctgaccgcgcgtctgatcgaccgtccg
atccgtccgctgttcccggaaggcttcctcaatgaggtgcaggtcgttgcgaccgtggtt
tccgtgaacccgcaggtcagcccggatatcgtggcgatgatcggcgcatccgccgcgctg
agcctgtctgggatcccgttcaacggcccgatcggcgccgctcgcgtaggttacatcaac
gatcagtacgtgctgaacccgaccatggatgagcttaagcagagccgtctggacctggtg
gtagccggtactgataacgccgtgctgatggtggaatctgaagccgatctgctcagcgaa
gatcagatgctgggcgcggtggtcttcggccacgatcagcagcaggttgtgattgaaaat
attaaggcgctggcggctgaagtcggtaaaccgcgctgggaatggcatgcgccggaagtg
aacgttgcgctgcagcaccgcgtggccgagatggccgaagcccgcctgggtgaagcctat
cacatcactgaaaagcaggcccgctacgcgaaagttgacgagatcaaagaatctgtcatc
gccgatctgctggcagaagacgatgcgctggatgccggtgagatcagcgacatcctgggt
gcgctggagaaagccgtggtgcgtggccgcgttctgcgcggtgagccgcgtatcgatggc
cgtgagaaggacatgatccgtgcgctggacgtacgtaccggcgtgctgccgcgtacccac
ggctctgcgctgtttacccgcggtgaaacgcaggcgctggtgacggcgaccctgggcacc
gagcgcgacgcacagaacatcgatgagctgaccggcgagcgtactgaccgtttcctgcta
cactataacttcccgccgtactccgtcggtgaaaccgggatgatgggctcaccgaagcgc
cgtgaaatcggccatggccgtctggctaagcgcggtgtgctggcggtaatgccgtctcag
gatgcgttcccgtacacggtgcgtgtggtctctgaaatcaccgaatccaacggttcctct
tctatggcctctgtctgcggtgcctctctggcgctgatggacgccggtgtgccgatcaaa
gccgccgtggctggtatcgccatgggtctggtgaaagagcaggataactttgtcgttctg
tctgacatcctgggtgacgaagaccacctgggtgatatggactttaaagtggccggtagc
cgcgacggcgtgaccgcgctgcagatggatattaagatcgaaggcatcacccgcgagatc
atgcaggttgccctgaaccaggccaagggtgcgcgtctgcatatcctgggtgtgatggag
caggcgatcaatgcaccgcgcggcgatatctccgagttcgcaccgcgtatccataccatt
aagatcaatcctgagaaaatcaaggacgtgatcggtaagggcggctctgtgatccgtgcg
ctgacggaagagaccggcaccaccatcgaaatcgaagatgacggtaccgttaagatcgca
gcgaccgacggtgataaggcaaaacacgccattcgccgtatcgaagagatcaccgccgag
atcgaagttggccgtatctatcagggtaaagtgacccgtatcgttgactttggcgccttt
gtggccattggcggcggtaaagaaggtctggttcatatttctcagatcgccgacaagcgc
gtagagaaagtgaccgactacctgcagatgggtcaggaagtggctgttaaggtgctggaa
gtcgaccgtcagggtcgcgtacgtctgagcatcaaggaagccaacgccagcgcagctgcg
ggtcaggacgcaccggctgacgcagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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