KEGG   Edwardsiella piscicida C07-087: ETAC_07105Help
Entry
ETAC_07105        CDS       T02509                                 

Gene name
oppD
Definition
(GenBank) oligopeptide transporter ATP-binding component
  KO
K15583  oligopeptide transport system ATP-binding protein
Organism
etc  Edwardsiella piscicida C07-087
Pathway
etc01501  beta-Lactam resistance
etc02010  ABC transporters
etc02024  Quorum sensing
Module
etc_M00439  Oligopeptide transport system
Brite
KEGG Orthology (KO) [BR:etc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    ETAC_07105 (oppD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ETAC_07105 (oppD)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    ETAC_07105 (oppD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:etc02000]
    ETAC_07105 (oppD)
Transporters [BR:etc02000]
 ABC Transporters, Prokaryotic Type
  Peptide and nickel transporters
   Oligopeptide transporter [MD:M00439]
    ETAC_07105 (oppD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N AAA_29 DUF87
Motif
Other DBs
NCBI-ProteinID: AGH73542
Position
1619145..1620116
Genome map
AA seq 323 aa AA seqDB search
MKSSLLNVRSLRVTFATPDGDVTAVNDLNFSLDAGETLGIVGESGSGKSQTAFALMGLLA
PNGRIDGSASFDGREILNLPEKALNRLRAEEIAMIFQDPMTSLNPYMRVGEQLMEVLMLH
KGMSKAQAFDESVRMLDAVKMPEARKRMRMFPHEFSGGMRQRVMIAMALLCRPRLLIADE
PTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGQAR
DVFYHPSHPYSIGLLNAVPRLDAENGALLTIPGNPPNLLRLPAGCPFQPRCPYADAGCDA
APPLAAFGDGRLRACFRTVEELA
NT seq 972 nt NT seq  +upstreamnt  +downstreamnt
atgaaatccagtttactgaacgtacgctccctacgcgtgaccttcgcaacgccggacggc
gacgtcacggcggtcaacgatcttaacttctcgctggacgccggcgagacgctggggatc
gtcggtgagtccggttcgggaaagtcgcagaccgcgtttgccctgatggggctgctggcg
ccgaatggacgtatcgacgggtcggccagctttgatggccgcgagatcctaaatttaccg
gagaaggccctgaatcgcctgcgcgccgaagagatcgccatgatctttcaggacccgatg
acctccctcaacccctatatgcgcgtgggtgagcagctgatggaggtgctgatgctgcac
aaggggatgagcaaggcgcaggcgtttgatgagtcggtgcggatgctggatgcggtgaag
atgccggaggcgcgcaagcgcatgcgcatgttcccccatgagttttccggcgggatgcgc
cagcgcgtgatgattgcgatggcgctgctgtgccgcccacggctgctgattgccgatgaa
ccgaccacggcgctggatgtgacggtacaggcgcagatcatgacgctgctcaatgagctg
aagcgcgagttcaataccgcgatcatcatgatcacgcacgatctgggggtcgtggccggt
atctgtgacaaggtgctggtgatgtatgccgggcgaaccatggagtatggccaggcgcgc
gacgtgttctatcacccctcgcacccgtactccatcgggctgctgaacgcggtgccgcgt
ctggatgctgagaacggagcactgctgacgattccaggcaacccgccgaacctgctgcgt
ttgccggccggctgcccgtttcagccgcgctgcccctatgccgatgccggctgcgatgcg
gcgccgccgctggcggcctttggcgatgggcgtctgcgcgcctgcttcagaacggtggag
gaactggcatga

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