KEGG   Edwardsiella tarda FL6-60: ETAF_0004
Entry
ETAF_0004         CDS       T02091                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
etd  Edwardsiella tarda FL6-60
Brite
KEGG Orthology (KO) [BR:etd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:etd03032]
    ETAF_0004
   03400 DNA repair and recombination proteins [BR:etd03400]
    ETAF_0004
Enzymes [BR:etd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ETAF_0004
DNA replication proteins [BR:etd03032]
 Prokaryotic type
  DNA Topoisomerases
   ETAF_0004
DNA repair and recombination proteins [BR:etd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ETAF_0004
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: ADM40127
UniProt: A0A0H3DLL4
Position
3645..6059
AA seq 804 aa
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
VTIHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRRDGHVHEQIYRHGVPAAPLKVVGDTEQTGTRVRFWPSMETFSNVV
EFQYDILAKRLRELSFLNSGVSIRLRDKRNDREDHFHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNSYMENE
GYTKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESLMNERLAEY
LLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQMSIALDGAALHINAAAPALAGEPLEKLVAEHYQVQKLIGRMERR
YPKAVLNQLIYQPTLSEADLGNQAQVEQWINSLVATLNEKEQHGSVYSARVLENRERQMF
EPLVRVRTHGVDTDYAFDFDFVHGAEYRRICALGEKLRDLLEESAFVERGERRQPVASFE
QALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPEGRRMLRVTIKDAVAADQLFTTL
MGDAVEPRRAFIEENALKASNLDF
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcaaatacgtatgactcctcaagtatcaaggtattaaaagggctggatgccgttcgt
aagcgcccgggcatgtacatcggggataccgatgatggtacgggtctgcaccacatggtg
tttgaggtggtggataacgcgattgacgaagcgctcgctggttattgcaaagatatcatc
gtcaccattcacagtgacaactccgtctccgtacaggatgacggccgcggcatcccaacc
ggcattcacccggaggagggcgtctctgccgccgaggtcatcatgaccgtgctgcacgcc
ggcggtaagtttgacgataactcctataaggtctccggcggcctgcacggcgtgggggtt
tccgtggtgaacgccctgtctgaaaagctggagctggtgatccgtcgcgacggccatgtc
catgagcaaatctaccgacacggtgtgccggcggcgccgctgaaagtggttggcgacacc
gagcagaccggtactcgcgtgcgtttctggccgagcatggagaccttcagcaatgtggtc
gaattccagtatgacattctggctaagcgcctgcgcgaactctctttcctgaactccggc
gtctccatccgcctgcgcgataaacgcaacgatcgcgaagatcatttccactatgagggt
gggattaaggcgtttgtcgagtatctgaacaagaacaaaacgccaatccatccgaacgtg
ttttacttttcgaccatgaaggatgatatcggcgtagaagtggcgctgcagtggaacgat
ggcttccaggagaatatctactgctttaccaataacatcccgcagcgcgacggcgggacc
catttggccggtttccgtgcggcgatgacccgtacgctgaacagctacatggaaaacgaa
ggctataccaagaagagcaaaatctccgctaccggtgacgacgcgcgtgaggggctgatt
gccgtggtgtccgtgaaggtgccggaccccaagttctcctctcagaccaaggataagctg
gtctcttcggaggtgaaatccgccgttgagtcgctgatgaacgagcgtctggctgaatac
ctgctggaaaaccccagtgatgccaaaatcgtcgtcggcaaaatcatcgacgcggcccgc
gcacgtgaagccgcgcgtaaggcccgtgagatgacccgccgcaagggtgcgctggatctg
gccggcctgccgggcaagctggcggactgccaggagcgcgaccccgcccactcagagctt
tacttagtggaaggggactccgcgggcggctctgccaagcagggacgtaaccgtaagaat
caggccatcctgccgctgaaggggaaaatcctcaacgtcgagaaggcgcgcttcgacaag
atgctctcctcgcaggaggtcgcgaccctgatcaccgcgctgggctgcggcattggccgg
gatgagtacaacccggataagctgcgctaccacagcattatcatcatgaccgatgccgac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
attatcgagcgcggccatgtatatattgctcagccgccgctgtacaaggtgaaaaaaggc
aagcaggagcagtacattaaagacgatgaggcgatggatcagtatcagatgtccatcgcg
ctggacggcgccgccctgcatatcaacgctgccgcgcccgcgctggccggtgagccgctg
gaaaaactggtggcggagcattatcaggtgcagaagctgatcggtcgcatggagcgtcgc
tatcccaaggcggtgctgaatcagcttatctatcagccgacccttagcgaagccgatctg
gggaaccaggcgcaggttgagcagtggattaactcgctggtggcaacgctgaacgagaaa
gagcagcacggtagcgtctatagcgcccgcgttctggagaatcgcgagcgtcagatgttt
gagccgctggtgcgcgtgcgtacccacggcgtggataccgactacgcgtttgactttgac
tttgttcacggcgccgaatatcgccgcatctgcgcgctgggcgaaaagctgcgcgacctg
ctggaagagagcgctttcgtggagcgtggcgaacgtcgtcagccggtggccagctttgag
caggcgttggactggctggtgaaggagtcgcgtcgtggcctggccattcagcgctacaaa
gggctgggtgaaatgaacccggagcagctgtgggaaaccaccatggatccggaagggcgc
cgtatgctgcgcgtgaccatcaaggatgcggtggcggccgatcagctgttcaccaccctg
atgggggatgcggtagagccgcgccgggcctttattgaagagaacgcgcttaaagcgtcc
aatctggacttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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