KEGG   Edwardsiella tarda FL6-60: ETAF_0510
Entry
ETAF_0510         CDS       T02091                                 
Symbol
yfiF
Name
(GenBank) hypothetical tRNA/rRNA methyltransferase YfiF
  KO
K03214  RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
etd  Edwardsiella tarda FL6-60
Brite
KEGG Orthology (KO) [BR:etd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:etd03009]
    ETAF_0510 (yfiF)
   03016 Transfer RNA biogenesis [BR:etd03016]
    ETAF_0510 (yfiF)
Ribosome biogenesis [BR:etd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ETAF_0510 (yfiF)
Transfer RNA biogenesis [BR:etd03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    ETAF_0510 (yfiF)
SSDB
Motif
Pfam: SpoU_methylase SpoU_sub_bind
Other DBs
NCBI-ProteinID: ADM40634
UniProt: A0A0H3DN65
Position
593338..594519
AA seq 393 aa
MSDSLNGKNGKVKVMYVRDSDAADERQSRAPAKGRPGARGDRSRSDRNDRGDRSRSDRND
RGDRSRSDRNDRGDRSRSDRNDRGDRSRSDRSDRGDRAARPARSEQGVGERSPWRTVSLG
DNGGVGGESDHGGISGKSFIDPEQLRRQRAEETRVYGENACQALFASRPEAIVRAWFLQA
VTPRFREALRWMAANRKAYHVVDDAELTKASGTDHHGGVCFLIKKRRSLDAQQYLANQAE
DAVDCVLALENVANPHNLGGIMRTCAHFGIRGIIAPESAALESGAAVRTAEGGAEHVQAI
DAEDFSAALDTFRRAGYTIVTTSSHKGTTQLHRATLPAKIVLVVGHEGDGLSDGTLQQGD
LSVSIGGTGSVESLNVSVATGIMLAEWWRQNAR
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgagcgactctttgaatggtaaaaacggtaaagtaaaagtgatgtatgtccgcgactcg
gacgctgccgatgagcgtcagtcgcgtgcgcccgcgaagggtcgtccgggtgcgcgcggc
gaccgcagccgcagcgatcgtaatgaccgcggcgaccgcagccgcagcgatcgtaatgac
cgtggcgaccgcagccgcagcgatcgtaatgaccgcggtgaccgcagccgcagcgatcgt
aatgaccgcggcgaccgcagccgtagcgatcgcagtgaccgcggcgatcgcgcagcccgt
ccggcgcgcagtgagcagggcgtcggtgagcgttcaccgtggcgcacggtttctctgggc
gataacggtggcgtaggcggtgaaagcgatcacggtggtatcagcggtaaaagctttatc
gatccggaacaactgcgtcgtcagcgcgccgaagagacgcgagtatacggtgagaatgcc
tgccaggcgctatttgcgagccgtccggaggccatcgttcgcgcctggttcctgcaggcc
gtaacgccgcgcttccgggaggccctgcgctggatggcggctaaccgtaaggcttaccat
gtggtggacgatgccgagctgaccaaggcgtcgggaaccgatcatcacggcggcgtatgt
ttcctgattaaaaagcgtcgctctcttgatgcgcagcagtatctggccaatcaggcagag
gatgcggtggactgcgtgctggcgttggagaatgtggccaacccccataacctgggcggc
attatgcgcacctgtgcgcactttggcatccgcgggatcatcgccccggagagcgccgcg
ctggagtctggcgccgccgttcgtaccgccgaaggcggcgcggagcacgtacaggcgatc
gatgcggaagatttttccgcggcgctggataccttccgtcgcgccggctataccattgtg
acgacctccagccacaaggggacgacgcagctgcaccgtgcgacgctgccggcgaaaatc
gtgctggtggtcgggcatgaaggcgatggcctgtctgacggtacgctgcagcagggcgat
ctgagcgtctctatcggtggtaccggcagcgttgaaagcctgaatgtgtcggttgctacg
gggattatgttggccgaatggtggcgacagaatgcgcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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