KEGG   Edwardsiella anguillarum: ETEE_0103
Entry
ETEE_0103         CDS       T03245                                 
Symbol
rne
Name
(GenBank) Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
ete  Edwardsiella anguillarum
Pathway
ete03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ete00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETEE_0103 (rne)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ete03019]
    ETEE_0103 (rne)
   03009 Ribosome biogenesis [BR:ete03009]
    ETEE_0103 (rne)
Enzymes [BR:ete01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     ETEE_0103 (rne)
Messenger RNA biogenesis [BR:ete03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ETEE_0103 (rne)
Ribosome biogenesis [BR:ete03009]
 Prokaryotic type
  rRNA processing factors
   ETEE_0103 (rne)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 PNPase_C potato_inhibit
Other DBs
NCBI-ProteinID: AIJ06588
UniProt: A0A076LJ50
Position
87907..91092
AA seq 1061 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPSNYSAHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLQIPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWDAIKKAAEGRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILDLA
KQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE
NRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCNGTGTVRDNESLA
LSILRLIEEEALKENTREVHAIVPVPVASYLLNEKRDAVSAIEKRQPDVRVIVVPNEQMQ
TPHYAVMRVRKGEETHTLSYKLPQLHEAEACGEEEVPAERKRPEQPALAAFSLDVAAPPI
DAAQDKPVAADVAPTERPQPIADARPGLFGRLVASLKGIFAGDAAPAPVQEETPAVSAER
PREESRSSQERRGRRQNPRRERGERGDRPERSERPERGERPERGERPERANRDGRENRDE
QRRGRRQAQPTPATEGGADENAQQREEQQQRREQRNERQRRRQEDKRQAQQEVKALDAAA
QPDEEIAEESVPAQRRQRRQLSQKIRIGDSTPAVVSADPEAAVAPIADASVPALPAVNAQ
PQESAAAEEDNAPRHENGMPRRSRRSPRHLRVSGQRRRRYRDERYPQQSPMPLTLAVYSP
EMASGKVWISYPVAAPAAAETSALETPHVMEESTAALAIEMPAAVPAETARPEVIAEAVV
NDAAADEPVVQAPAILAPAAAVETQACDAIAQQPSPVVTDESATHAVCAAAAPTQEEALP
ALAQAEAQAAEAELKAEAEAEASVAAPLVPPSAMAPSDTHEHGRASAPMTTAPAPAYVAP
AAVVSTWVRPEYDFHGRGAAGADAASNQAAAPATKPVMPQE
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaatcaacgcaactcagcaggaggagttgcgtgtcgcccttgtggat
ggccagcgactgtacgatctggatattgaaagcccgggtcacgaacagaagaaagcaaac
atttacaagggtaaaatcacccgaattgaacccagtctggaagccgcctttgttgactac
ggcgccgaacgacacggtttcctgccccttaaagagatcgcccgcgaatattttcccagc
aactactccgcccacggtcgtcccaacattaaggacgtgctgcgtgaagggcaggaggtc
attgttcaggtcgataaggaagagcgcggcaacaaaggggctgcgctgaccacctttatc
agcctggcgggcagctatctggtgctgatgcccaacaacccgcgcgccggcggtatctcc
cgccgtatcgagggtgatgaccgcaccgagctgaaggaagcgctctcctctctgcagatc
cccgacggcatggggctgatcgtccgcaccgccggcgtcggcaaatccgccgaagccctg
cagtgggatctctccttccgcctgaagcactgggatgccatcaagaaagccgccgaaggc
cgccctgccccgttcctgatccatcaggaaagcaacgtcatcgtccgcgccttccgtgac
tatctgcgcccggacatcggcgaaatcctgatcgacaatccgaagatcctcgacctggcc
aagcagcatatcgccgccctgggtcgtccggacttcagcagcaaaatcaagctgtacacc
ggggagatcccgctgttcagccactatcagatcgagtcacagatcgagtctgccttccag
cgtgaagtccgcctgccctccggcggctctatcgttatcgacagcaccgaggcgctgacc
gccatcgatatcaactccgcccgcgctacccgcggcggcgatatcgaagagaccgcgttc
aacaccaacctggaagccgccgatgaaatcgcccgccagctgcgtctgcgcgacctgggc
ggtctgatcgtgatcgactttatcgatatgaccccggtgcgccaccagcgcgaggtcgaa
aaccgcctgcgcgacgccgtgcgtcaggatcgcgcccgtattcagatcggtcgaatctcc
cgctttggcctgctggagatgtcccgccagcgtctcagcccctctctgggcgaatccagc
caccatgtctgcccgcgctgtaatggcaccggtaccgtgcgtgacaacgaatcgctggcg
ctgtccatcctgcgcctgatcgaagaggaggcgctgaaagagaatacccgtgaagtgcac
gccatcgtgccggtaccggtcgcctcctatctgctgaacgagaagcgtgacgccgtaagc
gccattgagaaacgccagccggacgtgcgcgtcatcgtggtgcctaacgagcaaatgcag
accccgcactacgccgttatgcgggtgcgtaaaggcgaagagacccataccctgagctac
aagctgccacagctgcacgaagcggaagcctgcggtgaggaagaagtaccggcagagcgc
aagcgtccggagcagccggcgctggccgcctttagcctggatgtcgccgcaccgccgatc
gacgccgcacaggataagcctgtcgctgccgacgtcgcgccgaccgagcgcccgcagccg
atagccgacgcccgtccgggactgtttggtcgcctggtcgcctccctgaaagggatcttc
gccggcgacgccgcaccggcgccggtgcaggaagagacgcctgccgtcagcgctgagcgc
ccgcgtgaagagagccgttcctcgcaggagcgccgcggtcgtcgccagaacccgcgccgt
gaacgcggtgagcgcggcgatcgtccggagcgcagtgagcgtccagagcgcggtgagcgt
ccggagcgcggcgagcgcccagagcgtgcgaaccgcgacggccgtgaaaaccgcgacgaa
cagcgccgtggccgccgtcaggctcagccgacgccggcgacagagggcggcgcagatgag
aatgcccagcagcgcgaagagcagcagcagcgccgcgaacagcgcaacgagcgtcagcgt
cgtcgtcaggaagataagcgccaggcccagcaagaggtcaaggcgctggacgccgccgca
cagcctgatgaggagatcgcagaggagagcgtaccggcccagcgccgtcaacgccgtcag
ctgagccagaagatccgcatcggcgatagcacgccggcggtcgtcagcgccgacccagaa
gccgccgtggcgccgattgccgacgcgagcgttccggctctgcctgcggtcaacgcacag
cctcaggagagcgccgcagcggaagaggataacgcgccgcgccatgagaatggcatgccg
cgccgctcccgtcggtcaccgcgtcacctgcgcgtcagcgggcagcgccgtcgccgctat
cgcgacgagcgttatccgcagcagtcaccgatgccgctgacgctggcggtatactctccg
gagatggcctctggcaaggtatggatcagctatcctgtcgccgccccggcggccgccgag
accagcgcgctcgaaacgccgcacgtcatggaggagagcaccgccgcgctagcgatagag
atgcccgccgccgtaccggctgaaaccgcgcgtccggaggtcatcgccgaggccgtcgtc
aacgacgccgcggccgacgaaccggtggtgcaggcgccggcgatcctcgccccggccgct
gccgttgagacgcaggcctgcgacgcgatcgcgcagcagccgtcgccggtagtcactgac
gagagcgccactcacgccgtctgtgccgccgccgcaccgacgcaggaagaggcactgcct
gcattggcccaggccgaagcgcaggctgctgaagcggaactcaaagccgaagccgaagcc
gaagccagcgtagccgcccccctggtaccgccgtcggcaatggccccgagcgatacgcac
gaacacggtcgcgccagcgcgccgatgaccacggcaccggcgccggcctatgtcgcaccg
gcagcggtagtcagcacctgggttcgcccggagtatgacttccacggccgcggtgccgcc
ggtgcagacgctgcgtccaatcaggccgcagcgccagccacgaaaccggttatgccgcag
gagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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