KEGG   Enterococcus thailandicus: CK496_00795
Entry
CK496_00795       CDS       T05312                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
eth  Enterococcus thailandicus
Brite
KEGG Orthology (KO) [BR:eth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eth03021]
    CK496_00795
Transcription machinery [BR:eth03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CK496_00795
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE
Other DBs
NCBI-ProteinID: ASZ06536
UniProt: A0A179ER44
Position
complement(149000..149503)
AA seq 167 aa
MVFDGWKRRKYIKALEELADTQYEKMYRLAFNYSHSKEDALDIIQESFEKALKAIQKKNF
HEIEEFNAWFFRILISVSIDFWRKNKREAEYLDQNEQSWSFLNDSQHSYLEIEEIINQIS
SPNREIILLKFFEGFTLKEISVILALNENTIKTKLYRSLNELRSKLE
NT seq 504 nt   +upstreamnt  +downstreamnt
atggttttcgatggttggaagagaagaaaatatataaaagcgttagaagaactggcggac
acacaatatgaaaaaatgtatcgtctagcttttaactattcccattcaaaggaagatgca
ctagatattatccaagaaagttttgaaaaagcattgaaagctattcaaaagaaaaatttc
catgaaatcgaagaatttaatgcttggttttttcgaatcctcatttctgtttctattgat
ttttggcgaaaaaacaaacgcgaagccgaatatctcgatcaaaatgaacagtcatggtct
ttcttgaacgactcgcaacatagttatctcgaaatagaagaaatcatcaatcaaatcagc
agccctaatcgtgaaattattttattaaaattttttgaaggctttaccctcaaagagatt
tctgtcattttagcgctgaatgagaacacgatcaaaacaaaactatatcgaagcttgaat
gaattaagaagcaaactagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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