KEGG   Empidonax traillii (willow flycatcher): 114057413
Entry
114057413         CDS       T05887                                 
Symbol
VIPAS39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog
  KO
K23287  VPS33B-interacting protein in polarity and apical restriction
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:etl04131]
    114057413 (VIPAS39)
Membrane trafficking [BR:etl04131]
 Endosome - Lysosome transport
  Others
   Others
    114057413 (VIPAS39)
SSDB
Motif
Pfam: Vps16_C
Other DBs
NCBI-GeneID: 114057413
NCBI-ProteinID: XP_027739467
Position
Unknown
AA seq 491 aa
MSRARADEEEYWHSSKFRAFTFDDEDDELSQLKESKRAVNSLRDIVDDDDDDLERVSWSG
EPVGSISWSIKETASGSTSSLEGRDSSLQKGSSSYAALPKQASSYSLSNLFKGRNKLPSF
QSLSDALTDTGVKNYAPELRRPKAEYKDYSSDWSPRDTVRRMQRGKVCSLERFRSLQDKL
VLLDEAVAGHDGNVITAVLIFLKRTLRREILFRELEVRQVALCHLIHFLRETGEQKLLLD
LLRFLDRTEEVALSQYREHLNIQDVEKRREFLKGCIGLPFSAEDTSHVQDHYTLLERQII
IEANDRHLEMSGQSEIFRKYPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPTNLKKTF
KIPDKQYVLTALAARAKLRAWNDVDALLTTKNWLGYTKKKAPIGFHRVVEMLQRNNAPVQ
VLQEYVRLVEDVETRLNLATKYKCHDVVIETYRDLKDRIQLIAYKCKVERGSAEEEKINS
ILNNMQIRWKN
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgagcagggcgcgggcggacgaggaggagtactggcacagctccaagttccgggctttc
accttcgacgatgaggatgacgagctctcgcagctaaaggaatccaaacgggcagtgaat
agccttcgggatatcgtcgatgatgatgatgatgacctcgagagggtcagctggagtgga
gaacctgtgggaagtatctcctggtcaatcaaagagacagcctctggcagcactagctcg
ctggagggccgagactccagcctacagaagggctcttcctcctatgctgcgttacccaaa
caagcttcttcatactccctaagcaacctgttcaaaggacgaaacaaacttccaagtttc
cagtctctttcagatgccctcactgacactggagtgaaaaactatgccccagagctgcgc
agaccaaaagctgagtacaaggattacagcagtgactggagccccagagatacagttagg
cgaatgcagaggggcaaggtctgctctctagagagatttcgctccctgcaggacaagctg
gtgctcttggatgaagctgtggcagggcacgatgggaatgtcattacagctgtcctgata
ttcttgaaacggacactacggagagagatcttgtttcgggagctggaggtgcggcaggtg
gccttgtgtcacctgatccatttccttagagagacgggtgagcagaagttgcttctggat
ctgctcaggttcctagacaggactgaggaagttgctctgtcccagtatcgggagcacttg
aacatccaggatgtagaaaaaaggagggaatttctaaaaggctgcattgggctgccgttc
tcagctgaggatacctcccacgtccaagaccattacaccctgttggagcgacagatcatc
attgaggctaatgatcggcacttggagatgtctgggcagtcagagatatttcggaaatat
cctcgcaaggcttcaattctcaacatgccactagtgaccaccctcttctattcctgtttc
taccactacacagaggctgagggaacgttcagcagccccaccaacctgaagaaaacattt
aagattcctgataagcagtatgtgctgactgccctggctgcccgtgccaaactgcgagcc
tggaatgatgtggatgccctcctcaccaccaagaactggctgggctacaccaagaagaag
gcacctattggcttccaccgggttgtggagatgttgcagaggaacaatgctcctgtgcag
gtgctgcaggagtacgtgcgcctggtggaggatgtggagacccggttgaaccttgctacc
aaatacaagtgccatgatgttgtcattgagacctacagggatctaaaggatcgtatccag
ctgatagcatataagtgcaaggtggagcggggctctgcagaagaagagaagataaacagt
attcttaacaacatgcaaatccggtggaagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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