KEGG   Empidonax traillii (willow flycatcher): 114057648
Entry
114057648         CDS       T05887                                 
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03030  DNA replication
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114057648 (POLA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:etl03032]
    114057648 (POLA1)
Enzymes [BR:etl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     114057648 (POLA1)
DNA replication proteins [BR:etl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    114057648 (POLA1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N DUF1744 DNA_pol_B_2
Other DBs
NCBI-GeneID: 114057648
NCBI-ProteinID: XP_027740029
Position
Unknown
AA seq 1509 aa
MAESGAGGRDAMHESGSFAASRSRRERKNRRGQQEALERLKKAKAGEKLKYEVEEFTGVY
DEIDEDEYSKMVRDRQDDDWIVDDDGIGYVEDGREIFDEDLDDDALSSNKKGKGGKTSTV
DKKTMKKSVVSKPNTIKSMFLASAGKKNTDKTVDLSKDDLLGDILQDLNAETVQLSPPPL
IMLKRKRSAGVALNPFSVQSQTSKVITPVSKKAHAHLRKETLPPASLHPKHPNCTAKSVR
VSENEDTKYVQKPTENERIVKTVGEKATEVLSAELADDDQGMMDFDEEDFDEPMEAEHVE
TIPEIAENLKRDNKIEKKETEQLESEKKETSALSCSLPDISCWDRIDEDEADLVAAEVQL
DPNLLPLVNGENDEQVLRFYWLDAYEDQYSQPGVVFLFGKVWIESASTYVSCCVTVKNIE
RTVYLLPRETEMDLSTGKETEIPVTIMSVFKEFNDSISPKYKIMKFKSKKVEKYYAFEIP
DVPAKSEYLEVKYSAEHPRLPQDLKGQTFSHVFGTNTSSLELLLMSQKIKGPCWLEIKNP
QPSNQSVTWCKVEAVATKPGLVSVAKDLSLPPPPLVVMSFSMKTAQNPKTHQNEVVALAA
LVHQKFPLDKAAPQPPFQTHFCAVSKPNDCIFPYDFKEAIKRKNAKIEIAATERTLLGFF
LAKIHKIDPDVVVGHNIYGFDLEVLLQRINLCKVPHWSKIGRLRRSNMPKLGGRGGFAER
SAACGRMICDVEISAKELIRCKSYHLSELVHQILKTERVAILPEEIRNMYSDSHRLLFML
ENTWIDAKFILQIMCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYI
VPDKQVFKKPLQKLVDEDEDLEDQNKSNVGKKKAAYAGGLVLDPKVGFYDKFILLLDFNS
LYPSIIQEFNICFTTVQRLSSEAQKRAEVEEEEEIPELPDPSVEMGVLPKEIRKLVERRR
QVKQLMKQPDLNPDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREI
LMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGI
FKSLLLLKKKKYAALTVEPTGDGKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQ
PRDIIVENIQRRLIEIGENVISGQIPVNQFEINKALTKDPQDYPDKKNLPHVHVAMWINS
QEGRKVKAGDTVSYIICQDGSDLSASQRAYAPEQLKKQENLTIDTQYYLSQQIHPVVARI
CEPIEGIDSVLIATWLGLDPSQFRVHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFC
CLKCGTENIYDNVFDGSGRFIEPSLQRCSKTECEEPPFNYVVQMSNKLLLDIRRYIKKYY
NGWLICEEPTCQNRTRCLPLCFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDVD
YAMDKVVTEEEKEYLRRKPLRREVTEAYKRLKSTVDKCLSMSAYSEVNLGKLFSVTMGRS
VGESNNERQ
NT seq 4530 nt   +upstreamnt  +downstreamnt
atggccgagagcggtgccgggggccgggacgctatgcatgagtctggaagttttgcagca
tcacgttctagacgtgagaggaagaatagaagaggccagcaagaagcacttgaacgtctg
aaaaaagccaaagctggcgaaaaattaaaatatgaggttgaggagttcacaggtgtttat
gatgaaatagatgaggatgaatactccaagatggtcagggaccgtcaggatgatgactgg
attgttgatgatgatgggattggttatgtagaagatggaagggaaatctttgatgaagat
ctggatgatgatgctctcagttccaataagaaaggaaaaggtggcaaaacatctacggtt
gataaaaaaaccatgaaaaaatctgtggtgtcaaagccaaacacaatcaagtctatgttt
ttagccagtgctgggaagaaaaacacagataagactgtggacctgtcaaaggatgattta
ctaggggatattcttcaagatcttaatgctgaaacagttcagctaagtccaccaccactt
ataatgctgaagaggaaaagatctgctggagtagcactgaatcctttctctgtgcagtcc
caaacttccaaggtaatcactcctgtatcaaagaaagctcatgctcatctcagaaaggaa
acccttcctccggcttcattgcatcctaaacatcccaattgtacagcaaagtctgtgaga
gtctctgaaaatgaggataccaaatatgtgcaaaaacctacagaaaatgagaggatagtg
aagacagtaggagagaaagctactgaagttctgtctgcagaacttgcagatgatgatcag
gggatgatggattttgatgaggaggactttgatgaacctatggaagcagagcatgtggaa
actatacctgagatagctgaaaacttgaaaagagacaacaaaattgaaaagaaagagact
gagcagctggaatcggagaagaaagagacatctgccttaagttgttctctcccagatatc
tcatgttgggacagaattgatgaggatgaagctgatctagtagcagcagaagttcagcta
gaccccaatctccttccacttgtgaatggggaaaatgatgaacaagtcttaagattttat
tggctggatgcttatgaagatcagtacagtcagccaggtgtggtatttttgtttggcaaa
gtttggattgaatctgcaagcacctatgtcagctgttgtgtgacagtgaaaaatattgag
agaactgtttatctactgccacgtgaaacagagatggacctatctactggtaaagagacg
gagattccagtgactataatgagtgttttcaaggaatttaatgacagcatttcaccaaag
tataaaatcatgaagttcaaatccaagaaagtggaaaaatactacgcttttgagattccg
gatgtaccagcaaaatctgaatacttagaagttaaatattcggctgaacaccctcggctt
ccccaagatctgaaagggcaaacattttcacacgtgtttggaacgaacacctctagcctg
gaactcctcttgatgagtcagaagatcaaaggaccgtgctggctggaaataaaaaatcca
cagccttcaaatcagtcagtcacctggtgtaaagtggaggctgtggccacgaagcctggc
ttggtcagtgtggctaaagatctttctcttcctcctcctcctctggtggtcatgtccttc
agcatgaaaaccgctcagaacccaaagactcatcagaatgaggttgtagctcttgcagct
ctggttcatcagaaatttcctttggataaggctgcacctcagcctccttttcagacacac
ttctgtgctgtttccaaaccgaacgattgcatttttccttatgacttcaaagaagctatt
aaaagaaagaatgctaaaatagaaattgctgcaacagagagaacactgctgggatttttc
ctggcgaagattcacaaaattgacccagatgttgttgtgggtcataatatttatggattt
gatctggaagtgctgcttcaaagaattaatttgtgcaaagtccctcactggtccaagata
ggtcgactgaggaggtctaatatgccaaagcttgggggtcgaggagggtttgctgaaagg
agtgctgcctgcggtcgaatgatctgtgatgtagaaatttctgccaaagaattaattcgt
tgcaaaagttaccatttgtctgaactggtccatcagattttgaaaacagagagggtagca
attctacctgaggaaattcgaaatatgtacagtgattctcatcgcttactgttcatgctg
gaaaacacctggatagatgccaagttcattctccagatcatgtgtgagctgaatgttctg
ccactggctcttcagataacaaatatctctgggaatgtcatgtcgaggacaatgatgggc
ggacgatctgaacgtaatgagttcctgctgcttcatgcattccatgaaaaggactacata
gtgcccgacaaacaggttttcaaaaagcctctgcagaagctggtggatgaagatgaggat
cttgaagatcagaataaatcaaacgtaggaaaaaagaaagcagcatatgctgggggctta
gtcttggatcccaaagtcggtttttatgacaagtttattttgcttctcgacttcaacagc
ttgtacccatcaattatccaagagtttaacatctgctttaccacagtgcagagactgtca
tcagaagcacagaaaagagcagaggttgaagaagaggaagaaattccagagcttccggac
ccatctgtggaaatgggagttttgcctaaagaaatcaggaaactggtggagagaaggcgt
caagttaagcagttaatgaaacagccagatttaaatcctgacctgtatttacagtatgat
atcagacagaaagctttgaaactcactgctaacagtatgtatggctgcctgggattttcc
tacagcagattctatgccaaacctttggctgctttggtgacgtataaggggagagagatt
ttgatgcataccaaggagatggtgcagaagatgaaccttgaagtgatttatggagacaca
gattccattatgataaacactaatagtaccaatttggatgaagtcttcaagctggggaat
aagatcaaaagtgaagtgaacaagctctacaaattgttggaaattgatattgatggaatt
tttaagtccttgctattgttaaagaagaagaagtacgctgctctgactgtggaaccaaca
ggagatgggaaatacgtaactaaacaagaactgaaaggactggatatagtccgaagagac
tggtgtgatcttgcaaaagagactggaaactatgtaattggtcagatcctttctgatcaa
ccccgagacataatcgtggaaaatattcagaggcgacttatagaaattggagaaaatgtg
atcagtggtcagatcccagtcaatcaatttgaaataaacaaggcattgacaaaagatcca
caggattatcctgacaaaaaaaacttgccacatgtgcatgttgccatgtggataaactct
caagaaggccgaaaggtgaaggcaggagacacagtgtcatatatcatttgtcaggatgga
tcagatctcagtgccagccagcgagcatatgctccagaacagttaaaaaagcaagaaaat
cttactattgatactcagtactacctgtcacaacaaatacatccagtagtggctagaata
tgtgagcccatagaaggaattgattctgttcttattgcaacgtggctaggactggatccc
tcccaattcagagtccatcaccattaccataaagatgaggagaatgatgccttggttggt
ggcccagctcagctcactgatgaggagaaatatagggattgtgaaagattcaagttttgc
tgcctcaaatgcggaacagaaaatatttatgacaatgtctttgatggttcggggcggttt
attgaacccagcttgcaaaggtgcagtaagactgaatgtgaagagcctcctttcaactac
gtggttcaaatgagcaacaagttactgctggatattagacgctacatcaaaaaatattat
aatggttggttaatatgtgaggagccaacttgccagaatcgaacccgttgtcttcccctg
tgtttttcccggagtggccctgtgtgccaggcctgcaggaaggctgttctgagaccagag
tattctgataaggccctgtacactcagctctgtttctaccgatacatttttgatgtggac
tatgcgatggataaggtggttactgaagaagagaaagagtatttgaggaggaagccgctc
aggagggaagtgactgaggcctacaaaagactgaagagcactgtagacaaatgcctgtcc
atgagtgcctactcagaagtgaacctcggcaaactcttctctgtcactatgggaagatct
gtgggagagtccaataatgaaagacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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