KEGG   Empidonax traillii (willow flycatcher): 114060550
Entry
114060550         CDS       T05887                                 
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:etl03016]
    114060550 (PUS7)
Enzymes [BR:etl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     114060550 (PUS7)
Transfer RNA biogenesis [BR:etl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    114060550 (PUS7)
 Prokaryotic type
    114060550 (PUS7)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-GeneID: 114060550
NCBI-ProteinID: XP_027745907
Position
Unknown
AA seq 655 aa
METVETNSVSLKRPRSEDDVANADEIKRQKILEKSKTGNDSGQSIETVTQQPEDMKNEII
PNEESEEQEEEELEDSDEDGDPESFADMMKHGLTERDVGITKFVSSHKGFSGILKERYSD
FVVHEIGKDGRVSHLDDFSVPVDDEVNFEDPSEETFAVLSDEDKQRLEELQLFKNKETSV
AIEVIEDTKEKRTVIHQAVKSLFPGLETKTEDRDGKKYIIAYHAAGKKALAKVRTATDPR
KHSWPKSRGSYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVL
RITAQRLAHLNKCLMNFKLGNFSYKNHPLKLGELQGNHFTVVLRNITGTDDQIEQAMHSL
REIGFINYYGMQRFGTTAVPTYQIGRAILQNNWSEVMDLILKPRPGAEKGYLVKCREEWA
KTKDPAAALKKLPVKRCVEGQLLRGLLKYGMKNIISAFGIIPRNNRLMYIHSYQSYVWNN
MVSKRIEEYGLRAVPGDLILKGATAVHIEEGDVDNYTIHDVVMPLPGFDVIYPKHKIGEA
YKEMLVADNLDINNMRHKIRDYSLSGAYRKIIIRPQNVNWEVVAYDDPKIPLFTTDLDKL
EGKPLPVLPTDGKFRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggaaactgtagaaacaaatagtgtatccttgaaacgtcctcgctctgaggatgatgtg
gctaatgcagatgaaatcaaaagacagaagatcttggagaagtctaagacagggaatgac
tctgggcagagtattgagactgtaacacaacaacctgaggacatgaaaaatgaaataatt
ccgaatgaggaaagtgaggagcaggaagaagaagaactagaggacagcgatgaagatgga
gatccagagagctttgcagacatgatgaagcatggcctgacagaaagagatgttggcata
actaaatttgttagctctcataaagggttttctggaatcttaaaggagagatactcggac
tttgttgtccatgaaataggcaaggatggacgtgtgagccatttagatgacttttctgtt
ccagtggatgatgaggtaaattttgaggacccatcagaagaaacatttgcagttttgtca
gatgaagacaagcagcgtttagaggagctccagctttttaagaataaggaaactagtgtt
gccatagaggtaattgaagacaccaaagaaaaaagaacagtcatccaccaggctgtgaag
tccttgtttccaggactggagactaaaacagaagacagagatggaaagaaatacattatt
gcgtatcatgctgctgggaaaaaagcactggcaaaggtcagaactgcaacagatccaaga
aaacactcttggccaaaatctaggggaagctactgccactttgtactgtacaaggagaac
aaggacactatggatgccattaacgtcctatccaaatttttaagagtgaagccaaacata
ttttcctacatgggaactaaagataaaagggctataacagttcaagagatcgctgttctc
agaatcactgctcaaagacttgctcatttgaataaatgtttgatgaacttcaaattagga
aatttcagttacaagaaccatccactgaaattgggagaattgcaagggaatcatttcact
gttgttctcagaaacataacaggaactgatgaccagatagagcaagcaatgcactctctc
agggaaattggatttattaattattatgggatgcaaagatttggaaccacagctgttcct
acttaccaaattggcagagctatcctacagaacaattggagtgaagtaatggatttgata
ttaaaaccacgaccaggagctgaaaagggatacttagtgaaatgcagagaggaatgggca
aagactaaagatccagcagctgccctcaagaaactacctgtaaaaaggtgcgtggaaggg
cagcttctacgtggactcttaaagtatggaatgaagaacataatctctgcatttggcata
ataccaagaaataatcgtttaatgtatattcatagctaccaaagttatgtgtggaataat
atggtgagcaagagaatagaagaatatgggcttagagctgtaccaggagatctcatactt
aaaggagccacagctgttcatattgaagaaggagatgttgataactacactatccacgat
gtagtgatgccattgcctggatttgatgttatttatccaaagcataaaattggcgaggcc
tacaaggaaatgctcgtagctgacaatcttgatatcaacaacatgaggcataagatcaga
gattactcactttctggagcatacagaaagattatcattcgacctcagaatgtcaattgg
gaggttgttgcgtatgatgatcccaaaatcccattatttactacggatttggataaactg
gaaggaaaaccattaccagttctccctacagatggtaaattcagggcactaaagatggag
ttctcccttcccccatcaacttacgctaccatggcgattcgggaagttttgaaaatggac
acaagcataaagaaccagacacaactgaatactacctggttgcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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