KEGG   Empidonax traillii (willow flycatcher): 114062286
Entry
114062286         CDS       T05887                                 
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
  KO
K18409  ATP-dependent RNA helicase TDRD12 [EC:3.6.4.13]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114062286 (TDRD12)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    114062286 (TDRD12)
SSDB
Motif
Pfam: TUDOR CS DEAD Helicase_C C2-set Hydrolase_3
Other DBs
NCBI-GeneID: 114062286
NCBI-ProteinID: XP_027749353
Position
Unknown
AA seq 1239 aa
MNVPQGIVMDVVVLKIEDPSCFWLAVEECVPGLVYEVAYKNLNARMNQFYDRHKGVKELK
PEVIEEGQIYVVFSEELKCWCRAVFQSVQCHALHHPLRCFLVDYARYSLVASDNIRVPLG
LFTKLPYRAKKCSLYCTKPVTLHLDFCENTAKIGPAKRWDTAAIQHFRDLLKEATEVKAM
VQALEDNVFQVFLFVTVKDEKICVNDDLVTKYFARYEEPKGNAEGSADDSDMEASLNAEC
VPVEFVGPTFVPRPKLPFGEKVSPRPETGLRGFSSVLEETCQRPSRVVNENTVPMVNATR
GLPLKENKAVQTDSLPQFLNSDSLQTHTGENDQQFQGFQNLGEGKNFVFLSKKIEPSSVL
KTAPLSDGLKKELVQNKFSGPNFTESYCWPPVASGYDLVAISHQGNDPLLYIPPVLTFLQ
LKSASHALPHSSGPVALIVCPGWRKAQLVFDLLRMYKKGCRDLHPVLITLEQNKEATSRV
ETRGCEVLVTTPHSLLRLLERKSWLLCRLCHLVLDEIEVLLSDTTEQVFTILDCYKKATA
RAWGNPPHQIVAVGTQWNKHIPPLMEEFMNDPYIVITVVEEAAICGNVQQVVQPCRNSSK
IAELLKILDFTHTNLQKVLVFTDSENEVEMIHKALKSNSVVTLKKHKESKCNVSCVSERW
RKMHSSGTPVVLVLTDDCLEPLGITDATCVIHFSFPSLRILGQRLQSMTDTFCTLRKDSS
VDQEHTDARSVILLTGNSPCHAPEILGYLKHAGAEIPQQLHDLAARVLESEESEKLSRPL
CASLKTFGICRNRTACPDRHQINVSIDMAQNIPDEMIKTPERVMILPLHIVHATNYFGRI
VDKEKDQYAILAEEMQNYFKVPGHRTFVDAVEKSAFYGLCEGALCHRVQVVDIPAKEEEN
YDCKVTIKYIDEGRTSQVNSDQLLHLPAKFQSLPPQAVEFIVCRVKPIDNEIEWNPKVTD
HIRHKIKGRLHHAKIVHTLGRTAWVDPVIRVSSLSSVKVWINEYNIRSEILSTGLGTDNP
EHLEEIQKLCRHVLVSDYSKNLEHLSIKESTADLEKVSSPQDTSTEEDSPESCNTSGSYP
CDDIAPTEEAEDSMLHQHKCYHPEIKWFQDNETVTLKVKIPSAADTKCEFSNEKVVFSAR
SGEKLYLADLELQESVFAEKSMCVIKDTEAVIVLAKEKQGAWCKLLKKKNIHVSLDFEHW
EEPEEESSFTVGAGKLTFPAAGSEEWFDSSEYSDTESDE
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgaatgtgcctcaggggatagtcatggatgttgtggtactaaagattgaagatccaagt
tgcttttggcttgctgtagaagaatgtgtgccaggcctagtctatgaagtggcatacaaa
aacctgaatgctcgaatgaatcagttctatgacagacataaaggtgtgaaggaactaaaa
ccagaggtgatagaagagggccagatttatgtggttttcagtgaggagctcaagtgctgg
tgcagggcggtgtttcagtcggtgcagtgccacgcgcttcatcacccgctcagatgtttc
cttgtggattatgccagatacagtttggtggcatcagacaacattcgagttccattggga
ctatttacaaaactcccatacagagcaaagaagtgtagcctgtattgcacaaagccagtg
acgttgcatcttgacttctgtgaaaacactgcaaaaataggaccagccaaaagatgggat
actgctgctatccagcattttcgagaccttctcaaagaggctactgaggttaaagccatg
gtacaggcactagaagataatgtgtttcaggtgtttctttttgtgactgtaaaagatgaa
aagatatgtgttaacgatgatctggtcacaaagtactttgctcgttacgaggaacctaaa
gggaatgcagagggttctgcagatgattcagacatggaagcatcactgaatgctgagtgt
gttccagtggagtttgtgggtcctacgtttgtccccaggccaaaactgccgtttggggag
aaggtgtcaccccgtcctgaaacaggtcttcgtggttttagttctgttcttgaagagaca
tgccaaaggccaagccgagttgtaaatgaaaatactgtgcctatggtcaacgcaactcga
ggtttgcctttgaaggaaaataaagcagttcaaacagacagccttccacagttcttaaat
tccgattcccttcagacgcacacgggtgaaaatgaccagcagtttcagggttttcaaaat
cttggggaaggaaaaaacttcgtgttccttagcaagaaaattgagccatcatcagttttg
aaaacagcaccactttctgatggtctgaaaaaggaacttgttcagaacaaattttcaggc
cctaacttcaccgagtcttactgttggccgccagtagcttcaggatatgaccttgttgcc
atctcccaccagggaaacgatcctctgttatatattccaccagttcttacatttttgcag
ctgaaaagtgcctcccatgccttgccacactcgagtggaccagtagcccttattgtatgt
cctggatggaggaaggcacaacttgtttttgacctactgagaatgtacaagaaaggctgc
agagaccttcatccagtgttgataacccttgagcagaacaaggaagcgaccagccgtgtg
gaaacccgaggctgtgaagtattagtgactacaccacacagccttctgagactgctggaa
cgcaagagctggttattgtgtagactttgccatcttgttcttgatgagatcgaggtgctg
ttgtctgacaccactgaacaggtgtttactatattagattgttacaagaaggccactgct
cgagcgtgggggaatccaccgcatcagattgttgctgtgggaactcagtggaacaaacac
atcccacccttgatggaggagttcatgaacgatccttacattgtgataacagttgtcgaa
gaagctgccatctgtgggaatgtgcaacaggtcgtgcagccttgcaggaacagcagcaaa
attgctgaattactcaaaatactggattttacccacacgaatcttcagaaggtgctggta
ttcactgactcagaaaatgaagtagagatgattcataaggcactaaagagcaactcagta
gttaccttgaagaaacataaagagagcaagtgtaatgtcagttgtgtctcagagagatgg
agaaaaatgcacagttctggcactcctgttgtgttggttttaacagatgactgcctggag
cccttgggaattacagatgcaacttgtgtgatccatttcagttttccttctctaagaatc
ttgggccagcgcctacagagcatgactgacaccttctgcaccctgagaaaggattcttct
gtagatcaggaacatacagatgccagatcagtcattctgctgacagggaacagtccatgt
catgcacctgagattctgggctatttgaagcatgcaggagctgaaattccacaacagctg
catgatttggctgccagggtgctggaatctgaagaaagtgaaaaattgtcacggcccttg
tgtgcctctcttaaaacatttggcatttgcaggaatagaacagcgtgtccagatcggcac
caaattaatgtatcaatagacatggcccagaatatcccagatgaaatgataaaaacacct
gaacgtgtgatgattctgcctctccacattgtacatgcaacgaactactttggccgaata
gtggataaagaaaaggaccaatatgcaattcttgctgaagaaatgcagaattattttaag
gtaccaggacacaggacttttgtagacgccgtggagaagtcagcattttatgggttatgt
gagggagccctttgtcacagggttcaggtggtagacattccagcaaaagaggaagaaaat
tatgactgtaaggtcacaattaaatatatagatgaaggcagaacaagtcaagtcaatagt
gatcagctgcttcacttacctgcaaagtttcagagtctgccacctcaggctgtggaattc
atagtttgtagagtgaaacccattgataatgaaattgaatggaacccaaaggtgactgat
cacattcgtcacaaaattaaaggaagactacatcatgcaaaaatagtccataccttggga
aggacagcttgggttgacccagtgatcagggtttccagcctttccagtgtcaaggtgtgg
atcaatgaatacaacattcgatctgagattctgtccaccggtctcggaactgacaatcca
gaacatctagaagaaattcagaagctgtgcagacatgtgctagtgtcagattattcaaag
aacttggagcacttaagcataaaggagagcacagctgatcttgagaaggtgtccagtcca
caggatacgtcaacagaagaagattctcctgaaagctgtaatacttctgggagttatcca
tgtgatgatatagctccaacagaggaagcagaagactctatgctgcatcagcataaatgc
tatcatccagaaatcaagtggtttcaagataatgagactgttacactgaaggtaaaaata
ccgagtgcagctgacactaagtgcgagttctctaacgagaaggtggttttcagtgctagg
tcaggagaaaaactttatttggctgacctggaactgcaagagtctgtatttgcagagaag
tccatgtgtgtgattaaggatacagaggctgtgattgttctggcaaaagaaaaacaagga
gcatggtgcaaattactgaagaaaaagaatattcacgtgtctttagattttgaacactgg
gaggagcctgaagaggaaagctcttttacagttggtgctggaaaactgactttccctgct
gcaggaagtgaggaatggtttgactcctcagaatacagtgatacagaaagtgatgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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