KEGG   Empidonax traillii (willow flycatcher): 114062559
Entry
114062559         CDS       T05887                                 
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114062559 (WDR3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:etl03009]
    114062559 (WDR3)
Ribosome biogenesis [BR:etl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114062559 (WDR3)
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WDR54 WD40_like
Other DBs
NCBI-GeneID: 114062559
NCBI-ProteinID: XP_027749929
Position
Unknown
AA seq 922 aa
MGLTRQYLRYEPAALFGLVASARGSVAFVALRGERGRYVAVPGCEHVFVWDTRKGEKVLI
LKGLKQEVSCLCPSPDGLHLAVGYEDGSIRVFNLLSGEASITFNGHRAAVTALQYDHLGG
RLVSGSKDTEVIVWDVINESGLYRLRGHKDAVTQVLFLKEKNLLVTRGSFSSHCASGQVW
GMALLSKEKRLITGSADSELRVWDLTYIQEVKDPDEPESKKSKGPSPGTEENTEEDETLE
LDEHPEERIVKCSKVGSIVREGRDRVVTLATDRMGKFLACHGTDAVLEVFTVLSEEELQK
KLEKKIKKAKKKAKQKSEEAPESVELSLQEEIQRVTNVKASSKIKSFDLILSPKGELKIV
LLLQNNVIESYNLDLSAQVPQAVRASKITIGGHRSDVRTLAFSSDNIAILSAAAESVKIW
NRSTLQCIRTMDCEYALCSLFVPGDRQVIVGTKTGKLQLYDLASGSLMETLNAHDGAVWS
IALSPDQRGFVTGGADKCVKFWEFELVKDESSVQKRLSMKHVRILQLDEDVLCVRYSPNQ
KLLAVSLLDCTVKIFYIDTLKFFLSLYGHKLPVLCMDICYDGTLIATGSADRNVKIWGLD
FGDCHRSLFAHDDSVMYLQFVPKSHLFFTAGKDSKIKQWDADKFEHIQTLEGHHQEVWCL
ALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQQEAEYEESVAKEEQPVVPGETQG
ETGLAGKKTIETIKAAERIMEAIELYREEMAKLKEHNTICKAAGKEVPFPVNPILRAYGN
ITPSAYVLEVFKKVKSSELEESLLVLPFSYVPDLLRLFNEYIHLGSDVELLCRALLFLLK
IHFGQITGNHMLVTVIEDLKKTTISRVSEARDVLGFNMAGLQFLKREIEAKDEVTFFADA
TERFEEKKRKRKKKEKMVLAVL
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggggctgacgcggcagtacctgcggtacgagcccgccgcgctcttcgggctggtggcg
agcgccaggggcagcgtggccttcgtggcgctgcgcggggagcggggccgctacgtggcc
gtgccgggctgcgagcacgtgttcgtgtgggacactcggaaaggagagaaggttcttatc
ctgaagggtctcaagcaggaagtcagttgcctctgcccgtctccagatgggttgcacttg
gctgttgggtatgaagatggatcaatccgtgtcttcaacctcctaagcggagaagcgagt
atcactttcaatggacacagggctgcagttacagcgctgcagtacgaccatctgggtggc
cgcctggtgtctggctcaaaggataccgaagtcatcgtgtgggatgtcatcaatgagagt
ggtctgtaccggctgagaggacacaaggatgctgtcactcaggtccttttcttgaaggag
aagaacctgttggtcaccaggggttccttttcctcacactgtgcctctggacaggtctgg
gggatggctttgctatccaaagagaagcgtctgatcactgggagtgctgacagtgagctg
agggtgtgggatctcacgtacatccaggaggtaaaagaccctgatgagccagagtccaag
aaaagcaaagggccttcacctggcactgaagaaaacactgaagaggacgagaccttagag
ttggatgagcatcctgaggaacgcatcgttaagtgcagcaaagttggatccatcgtgcgg
gaagggagagaccgagtagttactcttgccacagaccgaatgggcaagtttttggcctgc
catggaacagatgctgttctggaagtgttcactgtcctttctgaagaggaattgcagaag
aaattggaaaagaaaattaagaaagcaaagaaaaaagccaagcagaagtctgaagaggca
cctgaaagtgtggagctgagcctgcaggaggagattcagcgggtcactaatgtcaaagct
tcctctaaaatcaagtcatttgacttgattctctctccaaaaggagagctgaagattgta
ctgttgctccagaacaacgtcattgagtcatacaacctggacctgtcagcacaagtccca
caggctgtccgtgcgtccaagataaccattggaggccaccgcagtgatgtcaggacgttg
gcttttagctctgacaacattgccattctctcagcagctgcagagtctgtaaagatttgg
aacagatcgaccttgcagtgcatccggacgatggactgtgagtacgcgctctgctcgctc
tttgtcccaggagatcggcaggtcattgttggcaccaagacagggaagctgcagctgtat
gacctggcttctgggagtctgatggagacacttaatgctcacgatggggcagtgtggtcc
attgctctttcaccagaccagcgtggctttgtgacaggaggtgctgataaatgtgtcaag
ttctgggagtttgagcttgtgaaggatgagagcagtgttcagaaaaggctttccatgaaa
catgtgcgcattttacagctggatgaagatgttctctgtgtacggtacagccccaaccag
aaactcctggctgtctccttactggattgcactgtgaagattttctatattgacacgctc
aagtttttcctctctctgtatggacacaaactgccagtgctgtgtatggacatctgttat
gatgggactctaattgcgactggctctgctgacaggaatgtgaagatttggggcttggat
tttggagactgtcaccgttctctctttgcccatgatgacagtgtgatgtatctgcagttt
gtgccaaaatcccatctcttcttcacagctgggaaggacagcaagatcaaacagtgggat
gcagataaatttgaacatatccagaccctggaggggcatcaccaggaggtgtggtgtttg
gcactcagtcccaatggagactacgtggtgtcagcatcccatgacaagtccctgcgcctc
tgggaaaggacgagggagccacttattttggaagaggagagggagatgcaacaagaagct
gaatatgaagagagtgtggcaaaggaagagcagcctgtggtgcctggagagacgcaagga
gagacaggcctggctggaaagaagactattgaaaccattaaagcggctgagaggatcatg
gaagctattgagctgtacagagaagagatggcaaaactaaaggaacacaataccatatgc
aaagctgcagggaaagaggttccctttcctgtcaaccccatcctccgtgcctatggaaat
attacgccttctgcgtatgtgctagaagttttcaagaaggtcaagtcaagtgaattggaa
gaatctctcctggtgctgcccttctcctatgtccctgacctgctcagactcttcaatgaa
tatattcacctgggttcagatgttgaactcctgtgccgagctctcctcttcctgctcaag
atacattttgggcagatcacaggcaaccacatgctggtgacagtgatagaagatctgaag
aaaactaccatctccagagtcagtgaggcccgggatgtactgggattcaacatggcaggg
ctccagttcctgaagagggagattgaggccaaggatgaggtgacattttttgctgatgcc
actgaacgttttgaggagaaaaagaggaagaggaagaagaaagagaagatggttcttgca
gtgctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system