KEGG   Empidonax traillii (willow flycatcher): 114064747
Entry
114064747         CDS       T05887                                 
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1
  KO
K11727  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114064747 (SMARCA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114064747 (SMARCA1)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRF complex
    114064747 (SMARCA1)
   CERF complex
    114064747 (SMARCA1)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 DBINO Myb_DNA-binding CHDII_SANT-like TPR_15 UBA_2
Other DBs
NCBI-GeneID: 114064747
NCBI-ProteinID: XP_027753870
Position
Unknown
AA seq 1033 aa
MDTDPSPGPGPAEEPRASTSTAPAAAHDPGAEEKNDPPFQLKLPPKAARPEKEVDPEYEE
KMKADRAKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRPRMKKDEKQSLISAGEYR
HRRTEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGI
LADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIG
DKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVE
RLHAVLKPFLLRRIKGEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMD
KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRV
LLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE
IKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDSELTEEDITTILERGE
KKTAEMNERLQKMGESSLRNFTMDTEMSLYNFEGEDYREKQKLSMMEWIEPPKRERKANY
AVDAYFREALRVSEPKVPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPR
NPDLPNAAQVQKEEQKKIDESMPLNTEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYGR
DDIDNIAREVEGKSPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALD
AKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQ
FRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEEKERAEKKKRGAKVTASQKRKADLAA
ENSGKKDAKKAKS
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggacacggacccgagccccggccccggccccgccgaggagccccgcgcctccacatcc
accgcccccgccgccgcgcacgaccccggcgccgaggagaaaaatgatcccccttttcaa
ctcaaacttcctccaaaagcagctagacctgaaaaagaagttgacccagaatatgaagag
aagatgaaagcagatcgagcaaaaaggtttgaattcctcctgaagcagacagaacttttt
gcacattttattcaacctgcagcacaaaaatcaccaacatctccattgaaagtcaagctg
ggacggccacggatgaagaaagatgaaaaacagagtttgatttcagctggggagtaccgt
cacaggcgcacggagcaggaggaggatgaagagctgctgtccgagagtcggaaaacgtct
aatgtgtgcattcgcttcgaggagtccccctcctatgtgaaaggaggaactctaagagat
taccaggtcagaggtttgaactggatgatctcattgtatgaaaatggtgttaatggcatt
ctggcagatgaaatgggtcttggtaagactctgcaaacaatagcattactaggctatctg
aagcattaccgaaacattcctgggccacacatggtcctggtcccaaaatcaactttgcac
aactggatgaatgagttcaagcgctgggttccatccttacgtgctgtttgcctcatcggg
gataaagatgccagggctgcatttatccgtgatgttatgatgcctggggaatgggatgtt
tgtgttacgtcatatgaaatggtaattaaagagaaatcagtcttcaaaaaatttaactgg
aggtacctggtaattgatgaagcccacagaataaagaatgagaagtctaagctgtcagag
attgtacgtgagttcaagacaacaaatcgattgctgcttacgggaactcctttacagaac
aacctccacgagctgtgggcattactcaattttctgttacctgatgtcttcaattctgca
gacgattttgactcatggttcgacactaaaaattgtctcggtgatcagaaacttgtggaa
agacttcatgctgttttgaagccatttctgttgcgtcgtataaaaggtgaagttgaaaag
agtttgcctccaaagaaggaagtaaaaatttatcttgggctcagcaaaatgcagagagaa
tggtatacaaggatcctgatgaaagacattgatatcctgaactcagctgggaaaatggat
aagatgcgtctgctgaatattctgatgcagctgcggaagtgctgcaaccatccctacctg
tttgacggtgctgagcccggccctccttacaccaccgacacacatctcatcaccaacagt
gggaaaatgttggtgctggataaactgctggcaaagctcagagagcaaggttcaagagtg
ctccttttcagtcagatgactcgcttactggatattttggaagactattgcatgtggcgt
gggtatgagtactgcaggcttgatggacagacaccacatgaggaaagagaagaagcaata
gacacatttaatgctcccaacagcagtaaattcattttcatgctgagtaccagagctgga
ggtcttggaattaatttggcaactgctgatgtggttattctgtatgattcagattggaac
cctcaagtagatctgcaagccatggaccgtgcgcatcgtattggtcaaaagaaaccagta
cgggtgttccgacttatcactgataatactgttgaagagaggattgtagaaagagctgaa
ataaaactgaggctggactctatagttatacaacaagggaggctcatagaccaacagtcc
aacaaactggcaaaagatgaaatgctgcagatgatccgccacggagccactcatgttttt
gcttccaaagatagtgagctgacagaagaagatataaccactattttagaaagaggtgaa
aagaagacggctgaaatgaatgaacgattgcagaagatgggggagagctccttacgaaat
ttcactatggacacagagatgagcttatacaactttgaaggtgaagattacagagaaaag
caaaagctgagcatgatggaatggattgagcctcctaaaagagaacgcaaagctaattat
gcagttgatgcttatttcagagaagccctgcgtgtcagtgaacccaaagtcccaaaggct
ccacgacctccaaaacaaccaaatattcaggattttcagtttttcccaccacggttattt
gaacttctggaaaaagaaattctgtattatcgtaagactataggatataaggtccccagg
aatcctgatcttccaaatgcagctcaggtacaaaaggaagaacaaaagaagatagatgag
tctatgcctctgaatactgaggaaactgaagagaaagaaaagcttctaacacagggtttt
acaaactggaataaaagagattttaaccagtttattaaagctaatgagaagtacgggcgt
gacgatatagacaatattgcccgtgaggtggaaggaaagtcacccgaggaggtcattgag
tattcagctgttttctgggaacgttgtaatgaactacaggacattgagaggattatggcc
caaattgaacgaggagaggcaagaattcaacggaggatcagtatcaagaaagccctcgat
gccaaaattgcaaggtataaagcaccttttcatcagctgcgcattcagtatggaacaaac
aaagggaaaaattacacagaagaagaagacaggtttttgatctgtatgctgcacaagatg
ggcttcgacaaagagaacgtgtacgaggagctgaggcagtgcgtgcgcaacgcccctcag
ttccgcttcgactggttcatcaaatccagaactgccatggagtttcagagacgctgcaat
actctcatatcattaatagaaaaagaaaatatggaaattgaggaaaaggaaagagctgaa
aagaagaaaagaggagcaaaagttacagcatcacagaaaagaaaagcagatttggctgct
gagaactctggaaaaaaggatgccaagaaagcgaagtcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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