KEGG   Empidonax traillii (willow flycatcher): 114068496
Entry
114068496         CDS       T05887                                 
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
  KO
K23002  RNA polymerase II-associated protein 3
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etl03021]
    114068496 (RPAP3)
Transcription machinery [BR:etl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     114068496 (RPAP3)
SSDB
Motif
Pfam: TPR_1 RPAP3_C TPR_2 TPR_8 TPR_11 TPR_16 TPR_9 TPR_19 TPR_14 TPR_12 TPR_7 TPR_17 ANAPC3 Fis1_TPR_C FAT
Other DBs
NCBI-GeneID: 114068496
NCBI-ProteinID: XP_027760439
Position
Unknown
AA seq 667 aa
MNAPNKTIELQLQMKQNAEELQDFVRELESWEKDIKEVDSELRKQSGVPEENLPPIRNKA
FKKKKKSKSKVPSKITSEENKKNKIKSYDYEAWGKLDVDKILEELDKEDSTHDSISPESD
SEEDGIRIDAEKALAEKEKGNNYFKQGNFDEAIKCYTRGMHSDPYNPVLPTNRASAFYRM
KKFSVAESDCNLALALDKNYIKAYVRRGAARFALKNLQGAKEDYEKVLELDANNFEAKNE
LKKIDQALSSKESSEQKEFEDARTGLTDGEKQRTEEQQLKQKAIAEKDLGNGYFKEGRYE
AAIECYTRGIAADGTNALLPANRAMAYLKIEKYEEAENDCTQALLLDASYSKAFARRGAA
RVALGKLKEAMQDFEAVLKLEPGNKQAMNELAKIRNELTEKEQRTHQEYPAVLIKETEIK
NIVKLIDDPLQIKTTKPLRRIEIEEVDDDTPDGDLPSTTSLVNNWRNSVSVGRTETLDQD
DLLATTDIPKAKHLKIEEISDTSPLKLPVSAKGISSTLHPSSPANKQREKDIRRSFMSTS
PVPAVPANSFQLESDFRKLKDSPENMYLYLKQIEPSLYAKLFQKSLDPDLFNQILKILHD
FYIEKEEPSLILEILQRLSELKRFDMAVMFMSGSEKKITQVLFNHVNHMGLKDASVEELK
KKYGIFS
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgaatgcaccgaataaaacgatagaactacagctgcaaatgaagcaaaatgctgaagag
ctgcaggattttgtgagagaattggagagctgggaaaaagatattaaagaagtggattct
gaactaaggaagcagagtggggtcccagaagagaatttaccaccaattcgaaacaaggct
tttaagaaaaagaagaaaagcaaaagtaaagtcccttcaaagataacctctgaagaaaac
aagaaaaacaagatcaagtcttatgattatgaagcatggggaaaacttgatgtggataaa
atacttgaagaactcgataaagaagatagtactcatgattctatatctccagaatcagac
tctgaagaagatggaattcgtatagatgcagaaaaggctcttgcagagaaggaaaagggt
aataactactttaaacaaggaaactttgatgaagctataaaatgctatactagagggatg
cattctgatccatacaatccagtattgcccacaaacagagcatcggctttttatagaatg
aagaagttttctgttgcggaatctgattgcaatttagcacttgctttagataaaaattac
attaaggcttatgtgagaagaggggctgctcgctttgctttgaaaaatcttcaaggtgct
aaagaagattatgaaaaagttttggagctggatgcaaataattttgaagctaaaaatgaa
ctgaagaaaattgatcaggctctgtcatcaaaagaaagttcagaacagaaagagtttgaa
gatgccagaacaggattaacagacggagagaagcagcgcactgaagagcagcaactcaag
cagaaagctattgcagaaaaagatctgggtaatggttatttcaaagaaggaaggtatgag
gctgcaatagaatgttacacccgtggtattgcagcagatggcaccaatgcgctgctgcca
gctaacagagccatggcctacctaaagattgagaaatatgaagaggcagaaaatgactgt
acacaagctctgctcttagatgcctcgtattctaaagcttttgccaggagaggagctgcc
agagttgctcttggaaagctaaaagaagctatgcaagattttgaagctgttctgaagctg
gaacctggaaataaacaagcaatgaacgaactcgctaaaataaggaatgaattaactgag
aaagaacagcgaactcatcaagaatatcctgcggtattgataaaagaaacagaaataaaa
aatatagtgaaactgattgatgacccattacagattaaaacaacaaagccattgcgaaga
atagaaattgaagaagttgatgatgatacaccagatggggacttgcccagcactacttct
ttagtcaataactggaggaattcagtgagtgttggaagaacagagactctagatcaggat
gatctcttggctacaacagatattccgaaagcaaagcacctgaaaatagaagaaatcagt
gatacatcaccattaaagcttcctgttagtgcgaaaggaatttcatcaacattgcatcca
tcctcccctgcaaacaaacagagagaaaaagatatcagaaggtcatttatgtctacttct
ccagttcctgctgttcctgcaaactctttccaacttgagtctgacttcaggaagttgaaa
gattccccagaaaacatgtacttgtacctgaagcaaatagagccctcgctttatgcaaag
ctgtttcagaaatccttagatccagatttgtttaaccagatactgaaaattctacatgat
ttctacattgagaaagaggagccatcgctcatccttgaaatcctccagaggctctctgaa
ttaaaaagatttgatatggcagtaatgtttatgtcaggctcagagaaaaaaattacacag
gtattattcaatcatgtgaaccacatgggattaaaagatgcttctgttgaagaattgaag
aagaaatatggcattttctcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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