KEGG   Edwardsiella tarda EIB202: ETAE_2882
Entry
ETAE_2882         CDS       T01121                                 
Symbol
ygdP
Name
(GenBank) dinucleoside polyphosphate hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
etr  Edwardsiella tarda EIB202
Pathway
etr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:etr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETAE_2882 (ygdP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etr03019]
    ETAE_2882 (ygdP)
Messenger RNA biogenesis [BR:etr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     ETAE_2882 (ygdP)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ACY85715
Position
complement(3033774..3034307)
AA seq 177 aa
MIDDDGYRPNVGIVICNRQGQVLWARRYGQNSWQFPQGGINAGETAEQAMFRELFEEVGL
GRKDVKILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCSEAEINMQRSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSVVMSLQESVAQGGRSSPGYRRKRG
NT seq 534 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgcccgaacgtaggtattgtaatctgtaaccggcagggg
caggtgctgtgggcacgtcgctatgggcaaaactcctggcagttcccgcagggcgggatc
aacgccggggagaccgccgagcaggcgatgttccgcgaactgtttgaagaggtggggctg
ggacgtaaggatgtgaaaattctggcctctacccgtaactggttacgctataaattacct
aaacgtttggtgcgttgggatacgaagccggtgtgtatcggccaaaagcagcgctggttt
ttactgcagctgctgtgcagtgaggcggagatcaatatgcagcgcagcaatacgccggag
tttgatggttggcgctgggtcagctattggtatccggtgcgtcaggtagtgtcgtttaag
cgcgatgtttaccgccgggtgatgaaggagttctcatccgttgtcatgtcattgcaggag
agcgtggcccagggggggcgttcgtctcccggctatcgccgtaaaagaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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