KEGG   Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_0544
Entry
ECUMN_0544        CDS       T00831                                 
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase, selenophosphate-dependent
  KO
K06917  tRNA 2-selenouridine synthase [EC:2.9.1.3]
Organism
eum  Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:eum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eum03016]
    ECUMN_0544 (ybbB)
Enzymes [BR:eum01000]
 2. Transferases
  2.9  Transferring selenium-containing groups
   2.9.1  Selenotransferases
    2.9.1.3  tRNA 2-selenouridine synthase
     ECUMN_0544 (ybbB)
Transfer RNA biogenesis [BR:eum03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    ECUMN_0544 (ybbB)
SSDB
Motif
Pfam: Rhodanese T2SSE AAA_16 AAA_18 AAA_23 DUF3333 AAA_22
Other DBs
NCBI-ProteinID: CAR11759
UniProt: B7N958
Position
complement(610418..611512)
AA seq 364 aa
MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGTCYKQQGS
DAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQRWLHEAGIDYPL
VDGGYKALRQTAIQATIELSQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG
RTLQPQLSQASFENLLAAEMLKTDARQELRLWVLEDESRMIGSNHLPECLRERMTQAAIA
VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE
LAAQLDTALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW
VKAQ
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaagagagacacacggaacaggactatcgtgccctgctgattgctgatacgcccatt
attgatgttcgcgcccctatcgagtttgagcaaggcgcaatgcccgccgctatcaacctg
ccgttaatgaataacgatgaacgtgccgccgttggcacctgctataaacagcaaggctca
gacgcggcgctggcgctggggcataaactggtggcgggtgaaattcgtcagcagcgcatg
gacgcctggcgggcagcgtgcctgcaaaatccgcaaggtattctctgctgcgcccgcggc
ggtcaacgttcacatattgtgcaacgctggttgcatgaagcggggattgattatccgctg
gtagacggcggttataaggcactgcgccagaccgcgattcaggcgaccattgaactgtca
caaaaaccgatagtgctgattggcggttgtactggcagcggtaaaacgctgttagtgcag
caacagccgaacggtgttgatctggaagggctggcgcgccatcgcggttcggcgtttggt
cgcacgttgcaaccgcaacttagccaggcgagttttgaaaatctgctggctgccgaaatg
ctaaaaaccgacgcccgtcaggagctgcgcctgtgggtgctggaagatgaaagccggatg
atcggttcaaatcacctgccggaatgtctgcgcgagcgaatgactcaggcggcgattgcg
gtggtagaagatccgtttgagatccgtcttgaacgcctgaacgaagagtatttcttgcgt
atgcatcatgattttacccacgcgtacggcgacgaacagggctggcaggagtattgcgaa
tacctgcatcacggactttcggcgattaagcgtcggctggggttacagcgctataacgaa
ctcgctgcccagctggatacggcgctgacaacgcaactcaccaccggcagcaccgacggt
catctggcctggctggtgccgttacttgaagaatattacgacccgatgtatcgctatcag
cttgagaaaaaagctgaaaaagttgtctttcgcggtgagtgggcggaagtggcggaatgg
gttaaggcgcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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