KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10001929mg
Entry
EUTSA_v10001929mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03030  DNA replication
eus03420  Nucleotide excision repair
eus03430  Mismatch repair
eus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EUTSA_v10001929mg
   03420 Nucleotide excision repair
    EUTSA_v10001929mg
   03430 Mismatch repair
    EUTSA_v10001929mg
   03440 Homologous recombination
    EUTSA_v10001929mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eus03000]
    EUTSA_v10001929mg
   03032 DNA replication proteins [BR:eus03032]
    EUTSA_v10001929mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10001929mg
Transcription factors [BR:eus03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    EUTSA_v10001929mg
DNA replication proteins [BR:eus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    EUTSA_v10001929mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     EUTSA_v10001929mg
   MMR (mismatch excision repair)
     EUTSA_v10001929mg
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     EUTSA_v10001929mg
SSDB
Motif
Pfam: Rep_fac-A_C Rep-A_N REPA_OB_2 tRNA_anti-codon zf-like
Other DBs
NCBI-GeneID: 18025677
NCBI-ProteinID: XP_006408983
UniProt: V4NUJ1
Position
Unknown
AA seq 642 aa
MPISLTPNAITAIKAGDVNLKPLLQVLDIKLIGKSQERSKDRYRLLISDGISAQYAMLAV
QLNDRVKSAQVEKGSIVQLIDYICSDVKGRNLIVVLNMETIVPHSETIGNPTMSADSDTK
AQNPLSDLGSISPTNRFVFNEPSIQHFVNKAPSGGVNIQNPVNNTPTFRPSVQPSYQPPP
SYRNHGPIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL
DSDGGEIRITCFNVVVDRFYDVIDVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV
ELCPDEDGSIPRQQFSFRPISDIENAENNTILDIIGVVTSVNPSVPILRKNGMETHRRIL
NLKDESGKAVEVTLWGEFCNRDGRQLEELVESAFFPVLAIKAGKVSDFSGKSVGTISSTQ
LFINPDFPEAHILRNWFDHGGKDTASSSISRDNMPGGGSRNEIRKTVSQIKEEGLGRSDK
PDWVTVKATISFIKTDSFCYTACPLMIGDKQCNKKVTQTGTNMWLCDRCNQESEECDYRY
LLQVQIQDHTGLAWVTAFQESGEEIMGCPAKQLYSLKYELQNDEEFAEIVRNRLFHQYML
KLKIKEESYADEQRVKMTVVKVDMVNYISESKYLLNSLVRSL
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgccgataagtttgactcccaacgccatcacggcgattaaagcaggcgacgtaaatttg
aagcctctgttacaggttttagatatcaaactgataggaaaaagtcaggagagaagcaag
gataggtaccgtttgctgatttcagatggtatctcagctcaatatgctatgctcgcggtt
cagctcaatgatcgagtcaagtcggcacaggttgagaagggatccattgttcagctgatt
gattacatttgcagcgacgttaaaggccgcaaccttattgtggtgctgaacatggagacc
atagtaccacattctgaaactattggcaaccccacaatgtctgcagattcagatacaaaa
gcccaaaacccgctctcagatctgggcagtatatcgcctacaaataggtttgtttttaat
gagccgtcgatccagcattttgttaataaagcaccttccgggggcgtaaacattcaaaat
ccagtcaacaatactccaactttcaggccatctgttcaaccttcatatcaaccacctcca
agctacagaaatcatggacccataatgaagaatgaagctccagctcgaatcatccctatt
gctgctctcaacccataccaaggtcggtgggctattaaggctagagtaactgcaaaagga
gatatcagacgatataataatgccaaaggagacgggaaagttttctcctttgacctgctt
gactctgatggaggggagattcgtattacttgctttaatgttgttgttgaccgattctat
gatgttatcgatgttggcaaggtctatttgatctcaaagggaagtttgaagcctgcacag
aaaaatttcaaccacttaaagaacgaatgggaaatttttttggagtcaacttcgactgta
gagctttgccctgatgaagatggctccataccaaggcagcagttctccttccgtcctata
agtgacattgagaacgctgagaacaatacgatactcgatatcattggagttgtgacttct
gtgaatccctcagtgccaatcttgagaaagaatgggatggaaacccataggagaatcctg
aatctgaaggatgaatctggtaaggccgtagaagttacgctatggggagaattctgtaat
cgagatggtcggcaactcgaagagttggtcgagtcagcttttttcccggttttagcaata
aaagctggtaaagtgagtgacttcagtgggaaatcagttgggactatatcgtcaacacag
ctcttcataaatccagattttcctgaagcgcatatactgagaaattggttcgatcacggg
gggaaagatactgcctcctcttccatttccagagacaatatgcctggaggaggttcgagg
aacgagataagaaaaactgtttctcagatcaaagaggaaggtcttggaagatcagataag
cctgactgggtcactgtgaaagcaactatatcattcatcaaaaccgatagcttctgttac
acagcttgtcctttgatgattggagataaacaatgcaacaaaaaggtgacacagactgga
acaaacatgtggctctgtgaccggtgcaaccaagagtccgaggaatgcgactacagatac
ctacttcaggtgcagattcaagaccacacaggattggcttgggttaccgcgtttcaagaa
tccggtgaagagatcatgggttgtccggctaagcagctttacagcctgaaatacgaattg
cagaatgatgaagaattcgcagagattgttagaaacagactgtttcatcagtacatgttg
aagctgaagatcaaagaagaatcgtacgcggatgaacaaagagtgaagatgaccgtggtg
aaggtagatatggttaattacatatccgagagtaaatacttgctcaattcgctcgtaagg
tctctatag

DBGET integrated database retrieval system