KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10004203mg
Entry
EUTSA_v10004203mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    EUTSA_v10004203mg
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:eus01007]
    EUTSA_v10004203mg
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eus03016]
    EUTSA_v10004203mg
Enzymes [BR:eus01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     EUTSA_v10004203mg
Amino acid related enzymes [BR:eus01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   EUTSA_v10004203mg
Transfer RNA biogenesis [BR:eus03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    EUTSA_v10004203mg
 Prokaryotic type
    EUTSA_v10004203mg
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N HDA2-3 CENP-F_leu_zip Occludin_ELL YabA Mt_ATP-synt_D
Other DBs
NCBI-GeneID: 18012395
NCBI-ProteinID: XP_006394964
UniProt: V4K406
Position
Unknown
AA seq 451 aa
MLDINLFREEKGNNPEIIRESQRRRFASVEVVDEIISLDKEWRQRQYEVDNFRKEFNKLN
KEVAKLKISGGDATQLIQQTEKNKKDSAEREAAVRDAYAALKAKLETVGNLIHDSVPIDN
DEANNLVTKTWGEKRVATPGQKLKNHVDLVELLEIADTKRGADIAGARGFYLVGDGVDLN
QALINFGLTFLKKRGFKRLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE
QPLCSYHADEWIHPTELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN
ENDSWAMLDEMMKNSEDFYQALKLPYRVVSIVSGALNDAAAKKYDLEAWFPSSETYRELV
SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIP
EVLQPFMGGETFLPFKAKPVAAETKGKKSKA
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttggatatcaatctgtttcgagaagagaaagggaacaatccggagatcatcagggaa
tctcaacgccggagatttgccagcgttgaagtcgttgatgagatcatttctcttgacaaa
gaatggcgtcagcgtcaatatgaagtagataatttccgaaaagagttcaacaagctcaac
aaggaagtggccaagctcaaaatttctggtggtgatgctactcagctgattcagcaaaca
gagaaaaataaaaaagactctgccgagagagaggcggcagttcgtgatgcttatgctgct
ttgaaagccaaattggagacagttggaaatctcatccatgactcggttccaattgataac
gatgaggcaaataatctcgtgactaaaacttggggtgaaaagcgggttgccacgcctggt
cagaagctgaaaaaccatgtggatctcgttgagcttcttgaaattgcagataccaagaga
ggtgctgatattgctggagcaagaggcttttacctggtaggagatggtgtggaccttaac
caagctctgatcaactttgggctaaccttcttgaaaaagagaggattcaaaagattgcaa
cctccttttttcatgaggaaggatgtcatggccaagtgcgcacaattggcacagtttgat
gaagaactttacaaggtgactggtgaaggagatgacaaataccttattgcaactgctgag
cagcctctttgttcataccatgctgatgaatggatccatccgactgagcttcccaaaaga
tatgccggttattcgacctgctttagaaaagaagctggttcccacggaagagatacactt
ggcattttccgtgttcaccagtttgagaaaattgaacagttttgcatcactggtcctaac
gagaatgattcgtgggcaatgctcgatgagatgatgaagaactccgaagatttttaccaa
gcgctaaaacttccataccgagtcgtgtcaatcgtgtctggagcattgaacgatgcagct
gcaaaaaagtatgacttggaagcttggtttccttcgtcggagacttacagagagctcgtg
tcctgttccaactgtacagactatcagtctcgaaggcttgagatcagatacggtcagaaa
aagagcaatgagcagaccaagcagtatgtgcatatgctgaattcgactcttacggcgaca
gagaggaccatttgttgcattctcgagaactaccagcgagaagatggtgtggacatccct
gaggttttgcagccgtttatgggtggagagacgtttttgcccttcaaggctaagcccgta
gcggccgagaccaaaggcaaaaaatctaaagcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system