KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10012644mg
Entry
EUTSA_v10012644mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EUTSA_v10012644mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10012644mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    EUTSA_v10012644mg
SSDB
Motif
Pfam: WD40 Utp13 NBCH_WD40 ANAPC4_WD40 Nup160 WD40_like Ge1_WD40 PROPPIN Nbas_N Cytochrom_D1
Other DBs
NCBI-GeneID: 18018809
NCBI-ProteinID: XP_006400217
UniProt: V4KUN7
Position
Unknown
AA seq 878 aa
MAPQSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDAINIVDSSDSSVKSTIDGES
DTLTALALSPDNKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDANKNILFSGSDDATVRAWDLMAKNT
EKKCLAILEKHFSAVTSIAISEDGLTLLSAGRDKVVNLWDLHDYSCKTTVATYEVLEAVT
TVSSGTPFASFVASLDQKSKKKKTASQETHFITVGERGVVRIWKSEGSVCLYEQKSSDIT
VSSDDEESKRGFTAAAMLPSHLGLLCVTADQQFFIYSVVENLEESELVLSKRLVGYNEEI
ADMKFLGDEEEFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNTLVVT
GSKDKTVRLWNATSKSCIGAGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE
DSEEPTNLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK
RRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSC
GADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINLWHDSTATDKE
DEFRKEEETILRGQELENAVLDAEYTKAIRLAFELRRPHKLYELFAGLCKKRESNEQIVK
ALQGLEKEEFRLLFEYLREWNTKPNRCHIAQYVLYQTFNILPPTEVVQVKGIGELLEGLI
PYSQRHFNRMDRFVRSSFLLDYTLGEMSVIDPETETEYPKDKKKIEEEEAIASVSAMEQD
TEKVDQKTSSRKRKSQKSKDRSNKKRLVAVAPGNVIAV
NT seq 2637 nt   +upstreamnt  +downstreamnt
atggctcctcaatcgttaaagaagaactaccggtgctctcgatctctaaagcaattctac
ggcggtggtcctttcatcgtttcatctgatggttcgttcatcgcctgcgcctgtggtgac
gccattaacatcgtagattcttcggactcatcagtgaaatccacaatcgatggcgagtcg
gatacgctcactgctctggctcttagtcctgacaataagctactcttctccgctggacat
agtagacaaattcgagtttgggatttggaaaccttgaaatgcattcgctcttggaagggg
cacgagggacctgtgatgggtatggcttgccacgcatctggaggattgctagccactgcc
ggagctgataggaaagtccttgtctgggatgttgatggtggtttctgcactcattatttc
aaaggtcataaaggggttgtctcaagtatcttgttccatcctgatgcaaacaaaaatatt
cttttctcgggaagtgatgatgcaaccgttcgtgcctgggatcttatggcaaagaatact
gagaagaaatgtcttgccattttggagaagcacttttcagccgtgacttcaattgcgata
tcagaggatggactgactttactcagtgctggaagagataaagttgtgaacttgtgggac
cttcacgattatagctgcaagacaacagttgcaacttatgaggtactagaagctgtgaca
acagtttcttctgggacgcctttcgcttcatttgtagcttctcttgatcagaagagtaag
aagaagaaaactgcttctcaagaaacacattttattactgttggggaacgtggtgttgtg
cgcatctggaagtctgagggttcagtatgtctctacgagcaaaagtcgtcggatattact
gtcagctcagatgacgaggaatctaaaagaggattcactgcagctgctatgctgccttct
catcttggactgctttgtgtgactgctgatcagcagttttttatctactccgttgttgaa
aatttagaagaatcagagttagtgctaagcaagagacttgttgggtataatgaagaaata
gctgatatgaagttcctaggtgatgaagaggagtttctcgcagtagctacaaatctcgag
gaggttcgtgtttatgatgttgcaacaatgtcatgttcctacgtgttagctggccataag
gaagttgttctgtcccttgacacttgcgtatctagttctgggaatactctagtcgtcact
ggaagtaaagataaaactgtaaggctgtggaacgcaacaagcaaatcttgcattggagct
ggtacaggtcataatggcgatatcttagcggttgcttttgcgaagaagtctttcagtttc
tttgtcagtggcagtggtgatcgcacactgaaggtctggagccttgatggtatctcagag
gactcagaagagcccactaatttgaaaactagaagtgttgttgctgcccatgataaagac
attaattctgtggctgttgctcgtaacgatagcttggtttgcactggctctgaggatcgg
acagctagcatatggagactaccagacttggtgcatgttgttacacttaaaggacataag
aggcggattttttctgttgagttctcacctgttgatcagtgcgtaatgacagcatcaggt
gataaaacagtaaaaatatgggctatatctgatggttcatgcctcaaaacgtttgaaggt
catacctcaagtgtacttagggcctcattcataaccgatggaacccaatttgtctcatgt
ggtgccgatggtttattgaaactttggaatgtgaacactagcgaatgcattgccacatat
gaccagcacgaggacaaggtatgggctttggctgttggaaagaagacagaaatggttgca
actggtggaggcgatgcagttattaatttatggcatgattcaaccgctactgataaagaa
gatgaattccggaaagaggaagaaacaatattgagaggtcaagagctggaaaacgcagtg
ttagatgctgaatacactaaagccatacgattggcatttgagcttcgtaggcctcacaaa
ctttacgaactctttgctgggctctgcaagaaaagagagtcaaacgaacagattgtgaaa
gctcttcaaggacttgaaaaagaagagttccgtttactttttgaatatctccgagaatgg
aacacaaaaccaaaccgatgccacattgctcagtatgttctttaccaaaccttcaacata
cttcctcccacagaagtcgttcaggtaaaaggaattggagaactcctggaaggtttaatc
ccatattctcagagacatttcaataggatggacagatttgtaagaagcagtttcttgtta
gactacacactcggtgagatgtctgtgattgatccagagactgagactgagtatcctaag
gacaagaagaagatagaagaggaagaggccattgcttctgtgtctgcaatggaacaagac
acggaaaaagtagatcaaaagacttcttcgaggaaaagaaagtctcagaaatcaaaagat
agatcgaacaagaagagactcgttgccgtagctccgggaaatgtaatcgcagtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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