KEGG   Enterobacter hormaechei subsp. xiangfangensis: BFV63_18080
Entry
BFV63_18080       CDS       T04821                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
exf  Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03410  Base excision repair
exf03430  Mismatch repair
exf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:exf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BFV63_18080
   03430 Mismatch repair
    BFV63_18080
   03440 Homologous recombination
    BFV63_18080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:exf03400]
    BFV63_18080
DNA repair and recombination proteins [BR:exf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BFV63_18080
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BFV63_18080
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BFV63_18080
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: AOP92708
Position
complement(3794014..3795747)
AA seq 577 aa
MKAPIKLRRRDAGETADLPDTLPLLLKRLYASRGVRTASDLERSVKGMLPWQALSGIEQA
SEMLYDAFREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVAYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAVPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLASELDALNQTRKEIEQGMQAEALTLCEKLERSGDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLHP
NLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTEWIDPALLQGEVVSDGELSPAEMTME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVELAYKLDINEFRGNRSLQLIIDNIWPI
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaagccccgataaaactgcgccgccgcgatgcgggtgaaaccgcggatttaccagac
acgcttccgctgctgctaaagcggctgtacgccagccgtggcgtgcgtacggcaagcgat
cttgagcgcagcgtcaaaggcatgctgccctggcaagcgctgagtggcatcgaacaagcg
agtgaaatgctctacgacgcgttccgggaaggcacgcggattgtcgtggtgggcgatttc
gatgccgacggcgcaaccagtaccgcgctgagcgtactcagcctgcgtgcgctgggctgc
gataacgtggcttacctggtgccgaaccggtttgaagacggctacggcctcagcccggaa
gtggtcgatcaggcccatgcccgtggcgcacagatgatcatgaccgtggataacgggatc
tcttctcatgcgggggtcgatcatgcccatgcgctggggatcccggtactggtcaccgat
caccacctgccaggcgaaactctgcctgccgccgaagccatcattaacccgaacctgcgc
gactgcgatttcccgtcgaaatcgctggccggagtaggggtggcgttttatctgatgctg
gcgttacgcacgttgctgcgtgataagggctggttcgaatcgcgcgggattgccgtgccg
aacctcgcggagtatctcgatctggtggcgctgggaaccgtggcggacgtggtgccgctt
gataccaataaccgtattctcacctggcagggcttgagccgcattcgggcaggtaaatgc
cgtccggggattaaggcgctgctggaaattgccaaccgcgatccgctgaagctcgcggca
agcgatttaggctttgccctcggcccgcgcctgaacgcggcggggcggctggacgatatg
tcggttggcgtcgcgctgctgctgtgtgacaacatcggcgaagcgcgcgtgctggccagt
gagctggacgcactcaaccagacccgtaaagagattgagcaggggatgcaggccgaagca
ctgaccctgtgcgaaaagctggagcgcagcggtgacaccctgccgggcgggctggcgatg
tatcaccccgaatggcaccagggcgtggtgggcattctggcgtcgcgtattaaagagcgt
ttccaccgcccggtgatcgcgttcgcccccgccggggacggcacgctgaaaggctccggt
cgttccattcaggggctgcatatgcgcgatgcgctggagcgtctggatacgctgcatccg
aacctgatgattaagttcggcggtcacgcgatggcggcaggcctgtcgctggaagaggcg
aagttcgacgagttccagcgtctgtttggcgaactggtcaccgagtggatcgatccggct
ctgttgcagggtgaagtggtttctgacggtgagctttcaccggctgaaatgaccatggag
gtggcgcagatgctgcgcgatgccggcccgtgggggcagatgtttccggagccgcttttc
gacggacgttttcgtttgttgcaacagcgcatcgtgggcgaacgccatctcaaagtgatg
gtggaaccggtcggcggcggaccgctgctcgacggcatcgcctttaacgttgatacctcc
atctggccggacaacggcgtgcgcgaggttgagctggcctataagctggatattaacgag
ttccgtggtaaccgctcccttcagctcatcatcgacaatatctggccaatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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