KEGG   Exiguobacterium sp. U13-1: ESP131_12595
Entry
ESP131_12595      CDS       T04561                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
exu  Exiguobacterium sp. U13-1
Pathway
exu02020  Two-component system
exu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:exu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ESP131_12595
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ESP131_12595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:exu03021]
    ESP131_12595
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:exu02035]
    ESP131_12595
Transcription machinery [BR:exu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ESP131_12595
Bacterial motility proteins [BR:exu02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ESP131_12595
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 NPR1_like_C UPF0122 HTH_23 Sigma70_ECF bpX0
Other DBs
NCBI-ProteinID: AOT01055
Position
complement(2412687..2413460)
AA seq 257 aa
MREELQQLWDRWLTTRDIAVADLLLHNYEPLVQYHVQRLSATLPKSVDRDELKSLGMMGL
YDALQKFDQNHNNKFDTYAAFRIRGAILDGLRKIDWLPRSLREKAKRVEAAVEILEQSLQ
RTPTLDEVSSIVDMTPDEVKGALAESYFANVLSIDEAVTLQDEGKAMTVSYLDPDTATPE
DMLLMRELIAKLAEEVEGLSEKEQLVVSLFYYEELTLTEIGEVLGLSTSRISQIHSKALR
KLKNALGSAYLADRVAM
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcgtgaggaattacaacaactttgggatcgatggctgaccacacgcgatattgcggtg
gcagacctgttacttcacaattatgaaccacttgttcaataccatgttcagcgtttaagt
gcgacgttgcctaaaagtgtcgatcgagacgagttgaaaagtttagggatgatgggattg
tacgatgcgcttcaaaaattcgatcaaaatcataataataaattcgacacgtatgccgcc
tttcggattcgaggagctattttagatgggcttcgtaaaatcgattggttaccacgttcc
ttacgggaaaaagcaaaacgggtcgaggcagccgtcgagatccttgaacaatctttgcaa
cggacgccgacgttagacgaggtctcttccatcgtcgacatgacaccggacgaggtcaag
ggtgctttagcagaaagctattttgcgaatgtattatcgatcgatgaagcagtcacgtta
caggatgaggggaaggcgatgaccgtttcctatttagatccagatactgctacaccggaa
gatatgttattaatgcgtgagttgattgctaaactggcagaggaagtagaggggttatcc
gaaaaagaacaacttgtcgtctcgttgttctattatgaagaattgacgcttactgaaatt
ggtgaagtcctcgggctctcgacttcccgtatttcacaaatccattcaaaagcgcttcgg
aagttgaagaatgcgctcggaagtgcctacttagcagatcgtgtcgccatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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