KEGG   Ficedula albicollis (collared flycatcher): 101808019
Entry
101808019         CDS       T02815                                 
Symbol
SOX11
Name
(RefSeq) SRY-box 11
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:fab03000]
    101808019 (SOX11)
Transcription factors [BR:fab03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    101808019 (SOX11)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 101808019
NCBI-ProteinID: XP_005044283
UniProt: U3KJG5
Position
3:99313904..99315234
AA seq 403 aa
MVQQAESTEAESNLPREAMDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPNASQSPEKNAPASSGGSKSAKSSSKKCSKLKASSGSSPPKPGAKAAHH
GDYAGDEYVFGTLKVSSKTVKCVFMDEEEDDDEDEDELQLRIKQEAEEEDEDEEPGPQQL
RRYNVAKVPASPTLSSSAESTEGASLYEEVRGGAAAAGGGSRLYYSFKNITKQGPPPPQQ
PPGLSPASSRSISTSSAGSEEADDLLFDLSLNFSQHGHAAAELGAGAAGGNLSLSLVDKD
LDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggtgcagcaggcggagagtacggaggcggagagcaacctgccccgggaagcgatggac
accgaggagggcgagttcatggcttgcagccccgtcgctttagacgagagcgacccggac
tggtgcaaaacggcgtcggggcacataaagagaccgatgaacgccttcatggtgtggtcc
aagatcgagcggagaaaaatcatggagcagtccccggacatgcacaacgcggagatctcc
aagcgcctgggtaagcggtggaaaatgctgaaggacagcgagaagatccctttcatccgg
gaggcggagaggctgcggctcaagcacatggctgattaccccgactacaagtaccgtccc
aggaaaaagcccaaaatggacccgtcggccaagcccaacgccagccaaagtcccgagaaa
aacgcgcccgcgagcagcggcggcagcaagagcgccaagagctccagcaagaagtgcagc
aagctgaaagcctcctccggctcctcgccccccaagccgggagccaaagccgcccaccac
ggggactacgcgggagacgagtacgtcttcggcaccctgaaagtgagcagcaagacggtc
aagtgcgtcttcatggacgaggaggaggacgacgacgaggacgaggacgagctgcagctg
cggatcaagcaggaggcggaggaggaggacgaggacgaggagccggggccgcagcagctg
cggcggtacaacgtggccaaagtgccggccagccccaccttgagctcctcggcggagtcc
accgagggggccagcctgtacgaggaggtgcggggcggcgccgcggcggcgggcggcggc
agcagactctactacagcttcaagaacatcaccaagcagggcccgccgccgccgcagcag
ccgcccggcctctccccggcctcctcccgctccatctccacctcgtcggccggcagcgag
gaggcggacgacctgctcttcgacctcagcctcaacttctcccagcacggccacgccgcc
gccgagctgggggcgggcgccgccggcggcaacctctccctctcgctggtggacaaggac
ctggactccttcagcgagggcagcctcggctcccacttcgaattccccgactactgtacc
ccggagctgagcgagatgatcgcgggcgactggctggaagcgaacttctccgacctggtg
ttcacgtactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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