KEGG   Ficedula albicollis (collared flycatcher): 101809521
Entry
101809521         CDS       T02815                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin 43
  KO
K14305  nuclear pore complex protein Nup43
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101809521 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fab03019]
    101809521 (NUP43)
   03036 Chromosome and associated proteins [BR:fab03036]
    101809521 (NUP43)
Messenger RNA biogenesis [BR:fab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101809521 (NUP43)
Chromosome and associated proteins [BR:fab03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101809521 (NUP43)
SSDB
Motif
Pfam: WD40 CPSF_A
Other DBs
NCBI-GeneID: 101809521
NCBI-ProteinID: XP_005043931
Position
3:57503555..57513829
AA seq 484 aa
MPPGLHSVCDILWYGTSQFGSAVLAVLPPGFSSTCSPAERGLKRSPLGVSAAQQRVTRRC
RVNVILTLNPKHSAAAATRKNINAAPAERKPWGRPAARQRYPPGQALPSGRRRLPQGRCA
ARSLLPSLAEAYCEVLSTAFSSKCGIVSVQDNRVSIWSAGDLGNAGLNGEYHGEPHLLCD
IQHNGDVMDMQFLDQERLVVASSTGTVTIFRHHQNNQTLSANHRWEKAHYHVDQDTSCGG
AACTGVVCNNPEIVTVGEDGRINLFRADQRDAVRTIDNADSSTLHAVTFLRTTEILTVNS
IGQLKIWDLRQQRNEPSQIFSLAGDRVPLHCVDRHPNQQHIVATGGQDGMLSIWDIRQGT
MPVSLLNAHEAEMWEVHFHPSDPDHLFTCSEDGSLWHWDTSTNVSEKPSFLHQGGRSTAY
LSHSTINQSVVSAWLSNDPTKDRMEITNLIPNQTLSVNSLDVLGPCLVYGTDAEAIYVNR
QLFA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgccccccggtttacacagtgtgtgtgacattctatggtatggaacatcccagtttggg
tcagctgtcctggccgtgctccctcctggcttctcgtccacctgctcgccggcagagcga
ggactgaaaagatctccgcttggggtaagcgccgctcagcaacgagtaacgcgccgctgc
cgcgtcaacgttattctcacgttaaacccgaaacacagcgctgcggctgctactcggaag
aacattaacgctgccccagctgaaaggaagccgtggggccgccccgccgctcggcagcgt
tatccccctgggcaagcgcttccctccggccggcggcggcttcctcaggggcgctgcgca
gcccgcagcctattgccttccttggctgaggcttattgcgaggtactttcaacagcgttt
tcgagtaagtgtggtattgtttccgttcaggataacagggtctccatttggtcggccggc
gaccttggaaatgcgggcctcaatggtgaatatcatggagaacctcatctgctgtgtgac
atccagcacaatggtgatgttatggatatgcagtttttggatcaagagagactcgtggtt
gcctcatcaacagggactgtaactatattccgtcatcatcaaaataaccagacgttatct
gccaaccaccggtgggagaaagcccattatcacgtagatcaagacacatcttgtggtgga
gcagcctgcactggagtcgtctgcaacaacccagaaattgtcactgttggagaagatggt
agaataaatctcttcagagctgaccaaagggatgcagtaagaactatagacaatgcagac
agcagtacactccatgcagtgactttccttcgcacaactgagatcttgacagtaaattca
attggacagttaaaaatatgggacctcagacagcaaagaaatgagccatctcaaatattt
tctttggcaggtgacagagttccactgcactgtgtggataggcatcccaatcagcagcat
attgtggccacagggggccaggatggaatgctgagtatatgggacatcaggcagggtact
atgccagtgtccctgctaaatgctcatgaagcagaaatgtgggaagttcacttccatccc
tccgaccctgatcatttatttacgtgttctgaagatggatctctttggcactgggatact
tccacaaacgtgtctgaaaaaccatcttttcttcatcaaggaggaagaagcactgcctat
ctttcccacagtaccattaaccagtctgtagtaagtgcctggctaagcaatgatccgacc
aaagaccgcatggaaatcaccaacctgattccaaatcagactttgtctgtgaatagttta
gacgttctaggaccatgcctggtatacggtactgacgccgaggctatttatgtgaacaga
caactttttgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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