KEGG   Ficedula albicollis (collared flycatcher): 101811638
Entry
101811638         CDS       T02815                                 
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101811638 (ARID1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:fab03000]
    101811638 (ARID1B)
   03021 Transcription machinery [BR:fab03021]
    101811638 (ARID1B)
   03036 Chromosome and associated proteins [BR:fab03036]
    101811638 (ARID1B)
Transcription factors [BR:fab03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    101811638 (ARID1B)
Transcription machinery [BR:fab03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     101811638 (ARID1B)
Chromosome and associated proteins [BR:fab03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    101811638 (ARID1B)
SSDB
Motif
Pfam: BAF250_C ARID ABC_ATPase
Other DBs
NCBI-GeneID: 101811638
NCBI-ProteinID: XP_016152850
UniProt: U3KDG9
Position
3:complement(54106844..54443801)
AA seq 1831 aa
MGMGKDMGAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQQGSAMDPMVMKRPQLYGM
GNNPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMAGMQYPQQQIPPQYGQQGVSG
YCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHE
DLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGE
QSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGS
QSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSF
QQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPC
GTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQ
AAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSAGNA
PMGLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMS
PSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRY
LTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQ
STGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTP
NAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSG
AMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHM
DGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQGPG
QMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNR
TDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAP
SPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVE
ASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLS
QLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDEND
ECIDYFDEDEEEGEDEKVEGEEKSVVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLF
VVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKD
LEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKL
LEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKL
ILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
ILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGN
LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
EGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq 5496 nt   +upstreamnt  +downstreamnt
atgggcatgggcaaggacatgggcgcccagtacggagcggcgaacccggcctgggcagcg
gcacaacaaaggaaccacccggcgatgagccccgggaacaccgggcaggccatcagcagg
acccagcagggcagcgcgatggacccgatggtgatgaagcggccgcagctgtacggcatg
ggcaataaccctcactctcaggcacagcagagcagcccctaccccgggcagtcctacggc
cctcccggcccccagcgctatcccgtgggaatgcagggccgagccccggcagccatggca
ggaatgcagtatccacagcaacagatcccacctcagtatggtcagcaaggtgtaagtggc
tactgccagcagggccagcagccgtactacaaccagcagccgcagccccagcacctgccg
ccccaggcacagtatctgtcgcaggcccagcagaggtaccaggctcagcaggacatgtct
caggaaggctatggaaccagatctcaaccccctatggccccaggaaagcctaaccatgaa
gacttgaatctaatccagcaagaaagaccatcgagcttaccagttgaagtcttggcctcc
gaggatgctacatttggacacaaggatttgtctggatccattgacgacttgccgactgga
actgaagcaaccctcagctcagccgttagcgcatcaggctctacgagcagccaaggggag
cagagcaaccctgcacagtctccgttttcccctcatgcttctccacatctctctggcatc
cctgggggcccatcgccttcccctgtaggctcacccgttggaagcaaccagtcaagatct
ggtcccatttctccagcgagtattccaggcagtcagatgccaccacagcctcctggcagc
cagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggaccgaggt
tttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaaactgga
ccttccatgtcaccacacccttcacctggaggtcaagtgcatcctggaattggtagcttt
cagcagagtaattcaagtggtacttatgggcctcaaatgagccagtatggaccacaagga
aactactccagaccaccgacgtacagcggtgtgcccaacacaagttacagtggcccagga
cctggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccagccttgt
ggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccatttcctgga
aacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggccctgggatg
ggcccacccatgccgactgtgaaccgtaaggcacaggaggcggctgctgcagtgatgcag
gctgctgcaaactccgctcagagcaggcaaggcaattttcctgccatgaatcagagtggc
attatgggatccagctctccctacactcagccgatgaacaacagctctggcctgatgaac
ccgcaggctcctccttacagcatggcacccaacatggtgaacagctcagcaggtaacgca
cctatgggtcttgcagatatgatgacacccggtgagtccaaactcccccttcctctcaaa
gcagatggcaaagaagaaggagccccccagcccgagagcaagtcaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
ccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagccca
ggctggccaaagactccatcaagccctaaatcaagttcctccaccacaactggagagaag
atcactaaagtctatgagctaggaaatgagccggagcgcaagctgtgggtggatcggtac
ctgacgttcatggaggagaggggcactcctgtggccagtctgccagctgtgggcaagaag
cccttggacctgttcaggctctatgtctgtgtcaaagagatcggaggtttagcacaggtt
aataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagc
gcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagatt
gagcgaggggaggagccccctccagaagtcttcagcactggagataccaagaaacaacct
aagattcagccgccatctcctgctaattctggttccttgcaaggcccacagactccacag
tccactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagca
tccacacctcatggacagatgacacctatgcagggtggcagaaacagcgccgtcagtgtg
catgatcccttttctgatgtaagcgattcagcgttcccaaagcgaaactccatgacgcca
aatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgccatatgag
ccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatg
acccctggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctgga
gcaatgtccaacatgagcatgagccagcgacagcaattctcttatggaagtggctatgac
aggaggcatgaaccgtatgggcagcagtatccaggacaaggacctccctcaggacagcca
ccatatggaggacatcaacctggaatgtatccacagcagcagaactacaagagacacatg
gatggcatgtacgggcctccagccaaacgccacgaaggggatatgtataacatgcagtat
ggcaaccagcagcaggaaatgtataaccagtacggcaacgcttacacagggcctgacagg
aggcccatgcagggacagtacccttatccatataacagggagaggatgcagggcccagga
cagatgcagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcc
tccagtgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttac
cagaacaggcaaggtccaggaggccctgcacaggcccctccgtatccagggatgaatcgc
actgatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcat
gtcaaccaacggcagccttcttatatgtcatcctcagcttccatgcagcctatcactaga
cctcctcagtcatcctaccagacaccaccctctatgccaaaccacatctccagagctcca
agcccagcgtccttccagcgctcgttggaaaaccgtatgtctccaagcaagtctcctttc
ctgccctccatgaagatgcaaaaggttattcccacagttccagtgtcacaggtcacagga
cctccaccccaaccaccaccgattaggcgagagattaccttccccccaggctctgtagaa
gcatcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatatcgtaactcct
gaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcg
ctagacactattaatattcttctgtatgatgacagcactgttgctactttcaacctctct
cagttgtctggatttcttgagcttttagtagaatattttagaaaatgcctgattgacatt
tttggaatccttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaa
gcagccaagaaagatgatagtcagtccttggcagaggatactgggaaagatgagaatgac
gaatgtattgactattttgatgaagatgaggaggagggggaggatgaaaaggtagaagga
gaagaaaagagcgttgttttttccactcctggtgccattgctgatccaagtgagaggcca
aaacaagctagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctattt
gttgttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccac
tggcagcttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatg
gagattccaccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggac
ctcgaggggaaaggcgaatctgaggagcaacaagaaaagagcataacagcaaccattgat
gatgtcctctcagctcggccaggagcattacctgaagactcaaactctggctcccaaaca
gagagcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaattg
ctagaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaa
gactccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtg
cctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcttgggaaagttg
atccttcttcaccacgagcatccagaaagaaagcgagcgccgcagacttacgagaaagag
gaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgag
gtcttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtct
gcttacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgc
ccgtctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcct
cagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggacctt
atcttggccacccccccgttcagccgtcaggagaaactctacgctactttagttaggtac
gttggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcctatcgaacctt
gcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagcattggaaac
ttgataagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataac
ctcatgcacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgcagggca
gccaaggccttgctggccatggcgagagtggacgagaaccgctccgagttccttttgcac
gagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtc
atctgtgatgtactttttcagattgggcagttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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