KEGG   Ficedula albicollis (collared flycatcher): 101814424
Entry
101814424         CDS       T02815                                 
Symbol
TNNC1
Name
(RefSeq) troponin C1, slow skeletal and cardiac type
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04020  Calcium signaling pathway
fab04260  Cardiac muscle contraction
fab04261  Adrenergic signaling in cardiomyocytes
fab04814  Motor proteins
fab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:fab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    101814424 (TNNC1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    101814424 (TNNC1)
   04820 Cytoskeleton in muscle cells
    101814424 (TNNC1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    101814424 (TNNC1)
   04261 Adrenergic signaling in cardiomyocytes
    101814424 (TNNC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:fab04812]
    101814424 (TNNC1)
Cytoskeleton proteins [BR:fab04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     101814424 (TNNC1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EF-hand_4 SPARC_Ca_bdg DUF5580_M DUF6694 EMG1
Other DBs
NCBI-GeneID: 101814424
NCBI-ProteinID: XP_005053155
Position
12:6152690..6158955
AA seq 161 aa
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIM
LQATGETITEDDIEELMRDGDKNNDGRIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgacatctacaaggcagcggttgagcagctgacagaagagcagaaaaatgagttc
aaggctgcctttgacatctttgtgctgggagcagaggatggatgcatcagcaccaaggag
ctggggaaggtgatgaggatgctggggcagaaccccacccccgaggagctgcaggagatg
atagatgaggtggatgaagatggcagtggcactgtggactttgatgagttcctggttatg
atggtccggtgtatgaaagacgacagcaaaggaaaaaccgaagaggagctctcagacctg
ttcaggatgtttgataagaatgctgatggctacatcgacctggaggagctgaagatcatg
ctgcaggccacaggagagaccatcaccgaggatgacatagaggagctgatgagagatggg
gacaaaaacaacgatggcaggattgactatgatgagttcctggagtttatgaagggggtt
gaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (35)   

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